RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Nudt7Q99P30 236 aa13.6□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Pnp2Q9D8C9 305 aa13.6□□□□□ -0.23
Col3a1-201ENSMUST00000087883 EqtnQ9D9V2 337 aa13.6□□□□□ -0.23
Col3a1-201ENSMUST00000087883 TesclQ9DAJ7 231 aa13.6□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Gm10037E9PX85 104 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Dpysl2O08553 572 aaKnown RBP13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 PrnpP04925 254 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Ifngr1P15261 477 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Rab2bP59279 216 aaKnown RBP13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 StacP97306 403 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Rnf43Q5NCP0 784 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Sec24dQ6NXL1 1032 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Psapl1Q8C1C1 522 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 SdslQ8R238 329 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Fam118aQ91YN1 357 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Nxnl2Q9D531 156 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Gtf2e2Q9D902 292 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Scamp5Q9JKD3 235 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Rad18Q9QXK2 509 aaKnown RBP13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Insl5Q9WUG6 135 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Gm5493S4R2D1 92 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Gm5724L7N264 670 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Fv4P11370 679 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Ctla2bP12400 113 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Lmf1Q3U3R4 574 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Tmem181aQ3U3W2 474 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Olfr371Q8VGB8 312 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Msantd3Q9CR78 275 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Bhlhe40O35185 411 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Tlx3O55144 291 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Sec31bQ3TZ89 1158 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Olfr1364Q5SZS9 314 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 IgflQ6B9Z0 140 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Oog2Q7TPX8 476 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 MastlQ8C0P0 865 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Hmgcs1Q8JZK9 520 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Olfr394Q8VGR5 310 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Mrgprb4Q91ZC0 321 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Otub2Q9CQX0 234 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Hcar2Q9EP66 360 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Nmnat1Q9EPA7 285 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Ndst3Q9EQH7 873 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Cacng4Q9JJV4 327 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Arrdc4A0A0B4J1F4 415 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Vmn2r52L7N2B2 852 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Atpif1O35143 106 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Per1O35973 1291 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 FauP35545 74 aaKnown RBP13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Stt3aP46978 705 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Npbwr1P49681 329 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Pag1Q3U1F9 429 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Stxbp5lQ5DQR4 1185 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Vat1Q62465 406 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Cnih3Q6ZWS4 160 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Kctd9Q80UN1 339 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Lrrc39Q8BGI7 337 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Prox2Q8BII1 593 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Olfm2Q8BM13 448 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Nup54Q8BTS4 510 aaKnown RBP13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Sav1Q8VEB2 386 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 B4galt3Q91YY2 395 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Mrpl49Q9CQ40 166 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Ubqln5Q9D4I8 510 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Lpcat2bQ9D5U0 516 aa13.59□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Esp34G3UXG0 151 aa13.58□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Gm21800J3QMJ9 180 aa13.58□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Csnk2a2O54833 350 aaKnown RBP13.58□□□□□ -0.23
Col3a1-201ENSMUST00000087883 AaasP58742 546 aa13.58□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Il18P70380 192 aa13.58□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Gpr142Q7TQN9 365 aa13.58□□□□□ -0.23
Col3a1-201ENSMUST00000087883 AasdhQ80WC9 1100 aa13.58□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Rhbdf2Q80WQ6 827 aa13.58□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Gtf2a2Q80ZM7 109 aa13.58□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Olfr164Q8VF87 315 aa13.58□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Snx20Q9D2Y5 313 aa13.58□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Fank1Q9DAM9 344 aa13.58□□□□□ -0.23
Col3a1-201ENSMUST00000087883 TescQ9JKL5 214 aa13.58□□□□□ -0.23
Col3a1-201ENSMUST00000087883 Otud4B2RRE7 1107 aaKnown RBP13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Armc4B2RY50 1037 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 AccslQ3UX83 580 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 BC080695Q66JY9 481 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 HjurpQ6PG16 667 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Olfr857Q7TRF7 309 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Rgs7bpQ8BQP9 257 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Amigo3Q8C2S7 508 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 AcmsdQ8R519 336 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Il1rl2Q9ERS7 574 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Akr1a1Q9JII6 325 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Padi3Q9Z184 664 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Vmn1r12G5E8G1 307 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Scg5P12961 212 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Mapk14P47811 360 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Tas2r7P59530 312 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Gng2P63213 71 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Cdk18Q04899 451 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Gch1Q05915 241 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 PepdQ11136 493 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 ptchd1Q14B62 888 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 Doc2aQ7TNF0 405 aa13.58□□□□□ -0.24
Col3a1-201ENSMUST00000087883 PdhxQ8BKZ9 501 aa13.58□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 58.7 ms