RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 PrtgQ2EY15 1191 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Eef2kmtQ3UZW7 335 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Serpina3aQ6P4P1 422 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Igsf5Q7TSN7 370 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cpeb2Q812E0 521 aaKnown RBP9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Clec9aQ8BRU4 238 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Sh3rf2Q8BZT2 735 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tbl3Q8C4J7 801 aaKnown RBP9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Q8K207 121 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Slc8a2Q8K596 921 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Map3k21Q8VDG6 1002 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tmem246Q91YV9 403 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Adgre4Q91ZE5 689 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 SardhQ99LB7 919 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tex13bQ99MW5 186 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Inpp5eQ9JII1 647 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ap3m1Q9JKC8 418 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Mup6A2AV72 179 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Zfp973A2BE20 318 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Vmn2r116E9Q6I0 856 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Vmn1r176G3UW31 304 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Serpinb9cI7HJI5 387 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Dgcr6O35347 198 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tssk2O54863 358 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 HbaP01942 142 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ctla2aP12399 137 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Wnt3P17553 355 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Mapk1P63085 358 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 DsppP97399 934 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Pin1rt1Q3ULQ2 159 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 HecaQ3V1N5 544 aaKnown RBP9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Nxf3Q4ZGD9 553 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 AbrQ5SSL4 859 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Mettl3Q8C3P7 580 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Sit1Q8C503 180 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Nlrp10Q8CCN1 673 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Map2k7Q8CE90 535 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Glis1Q8K1M4 789 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Col25a1Q99MQ5 666 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Trim12aQ99PQ1 284 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 2310003L06RikQ9CV82 495 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Psg23Q9D2U0 471 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Q9D4W2 315 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Psg21Q9DAV5 471 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Maged1Q9QYH6 775 aaKnown RBP9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Unc80Q8BLN6 3261 aa9.47□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm37596A0A0A6YXL2 336 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Olfr1375A0A0N4SUP0 313 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Lcn5A2AJB7 192 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Btnl4A2CG29 586 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Zfp362B1ASA5 418 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm10639E9Q6L7 222 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Suv39h1O54864 412 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 MycP01108 439 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 En2P09066 324 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gsta2P10648 222 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Pabpc1P29341 636 aaKnown RBP9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Pcyt1aP49586 367 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 G6pdxQ00612 515 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cdk18Q04899 451 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Nr4a2Q06219 598 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Kcna7Q17ST2 489 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Secisbp2Q3U1C4 858 aaKnown RBP9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Smu1Q3UKJ7 513 aaKnown RBP9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Zscan26Q5RJ54 466 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Dnajc11Q5U458 559 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Lemd2Q6DVA0 511 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Hfe2Q7TQ32 420 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Mta1Q8K4B0 715 aaKnown RBP9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Il23rQ8K4B4 644 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gabarapl1Q8R3R8 117 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cdt1Q8R4E9 557 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gtf2a1lQ8R4I4 468 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Pcdhga9Q91XX9 932 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Eif3mQ99JX4 374 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 HadhbQ99JY0 475 aaKnown RBP9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Sesn3Q9CYP7 492 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Twist2Q9D030 160 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ift27Q9D0P8 186 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Dnase1l2Q9D1G0 278 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Rpn2Q9DBG6 631 aaKnown RBP9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Wwp2Q9DBH0 870 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Aldh6a1Q9EQ20 535 aaKnown RBP9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cldn9Q9Z0S7 217 aa9.46□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 2610001J05RikF2Z3Y9 59 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Gm11236J3QMS7 360 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 TspearJ3S6Y1 670 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Hmox2O70252 315 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Cacng1O70578 223 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 CryaaP24622 196 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 QrfprP83861 433 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 H2-M3Q31093 336 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 CdonQ32MD9 1250 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Nt5c3bQ3UFY7 300 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Dcdc2Q5DU00 475 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Med26Q7TN02 588 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Olfr735Q7TRM4 354 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Psmd11Q8BG32 422 aa9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 Krr1Q8BGA5 380 aaKnown RBP9.46□□□□□ -0.9
Ccdc40-202ENSMUST00000053440 C1rbQ8CFG9 706 aa9.46□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms