RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Hcar2Q9EP66 360 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Sh3bgrlQ9JJU8 114 aaKnown RBP9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Orc5Q9WUV0 435 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Cldn7Q9Z261 211 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Zfp600A2A7V0 737 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Cldn34b1B1AZQ8 209 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Pate3B3GLJ3 98 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Cldn24D3YXJ9 220 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Galntl6E5D8G1 601 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Vmn2r48E9Q5D8 855 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Vmn1r12G5E8G1 307 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Chrm1P12657 460 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Atp1b2P14231 290 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 DckP43346 260 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Rpl10lP86048 214 aaKnown RBP9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 AnpepP97449 966 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Rpl10Q6ZWV3 214 aaKnown RBP9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Vwa2Q70UZ7 791 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 AasdhQ80WC9 1100 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Ubap2lQ80X50 1107 aaKnown RBP9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 PeloQ80X73 385 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Prickle2Q80Y24 845 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Ap5m1Q8BJ63 490 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Map4k5Q8BPM2 847 aaKnown RBP9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Sh3rf2Q8BZT2 735 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 BpifcQ8C186 509 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Slc46a2Q8CA03 479 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Cldn34b2Q9D9N2 209 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Myh8P13542 1937 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Gm4924A0A1B0GR71 966 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Gm3336J3QMQ6 198 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Cyp1a1P00184 524 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 PgfP49764 158 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Cyb5r2Q3KNK3 276 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Ifngr2Q63953 332 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Polr2mQ6P6I6 366 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Olfr384Q7TRX8 312 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Zc3h10Q8R205 435 aaKnown RBP9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Hbp1Q8R316 516 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Ndufs4Q9CXZ1 175 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Fank1Q9DAM9 344 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Rgs17Q9QZB0 210 aa9.56□□□□□ -0.88
Syne1-201ENSMUST00000041639 Acp4D3YTS9 425 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 ThpoP40226 356 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Nsg2P47759 171 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Actr1aP61164 376 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Nxpe2Q3U095 558 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Syndig1lQ3USQ7 237 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Sim1Q61045 765 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Gata6Q61169 589 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Gpr17Q6NS65 339 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Zc3hav1lQ8BFR1 296 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Chrnb3Q8BMN3 464 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Sumf2Q8BPG6 308 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Pggt1bQ8BUY9 377 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Piwil4Q8CGT6 848 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Actr1bQ8R5C5 376 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Nudt7Q99P30 236 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Q9D454 513 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Tspan4Q9DCK3 238 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Zbtb32Q9JKD9 465 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Khdrbs2Q9WU01 349 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 KantrA0A1W2P7I0 76 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Olfr1153A2AVC0 318 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Olfr1306A2BFL7 312 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Olfr618K7N6B3 318 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Arpc4P59999 168 aaKnown RBP9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Sec24dQ6NXL1 1032 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Serpinb9fQ80UK5 377 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Slc41a2Q8BYR8 573 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Slc38a4Q8R1S9 547 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Il36gQ8R460 164 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Serpinb9gQ8VHQ1 377 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Coro6Q920M5 471 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Hacd2Q9D3B1 254 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Mgat4dQ9D4R2 373 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Plin3Q9DBG5 437 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 B3galt5Q9JI67 308 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Klrc1Q9Z202 244 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Zfp946F6VWU8 523 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Gp5O08742 567 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Kcnj5P48545 419 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Rpl26P61255 145 aaKnown RBP9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Rps13P62301 151 aaKnown RBP9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Tuba4aP68368 448 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Cd300lgQ1ERP8 331 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 ApofQ91V80 315 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Acsl6Q91WC3 697 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Lcn9Q9D267 178 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Dnajb9Q9QYI6 222 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 GzmkO35205 263 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 AldoaP05064 364 aaKnown RBP9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Ctla2aP12399 137 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Spryd7Q3TFQ1 196 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 StradaQ3UUJ4 431 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Olfml2aQ8BHP7 681 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Kctd7Q8BJK1 289 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Lrrc56Q8K375 552 aa9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 MepceQ8K3A9 666 aaKnown RBP9.55□□□□□ -0.88
Syne1-201ENSMUST00000041639 Olfr818Q8VG46 318 aa9.55□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 49.7 ms