RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 COL9A2Q14055 689 aaPredicted RBP14.08□□□□□ -0.16
SCARB2-221ENST00000640341 SYT6Q5T7P8 510 aaPredicted RBP14.08□□□□□ -0.16
SCARB2-221ENST00000640341 AGTRAPQ6RW13 159 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 CBLL1Q75N03 491 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 GAREM2Q75VX8 874 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 OTOP2Q7RTS6 562 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 SZRD1Q7Z422 152 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 PLPP6Q8IY26 295 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 FAM9CQ8IZT9 166 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 OVCA2Q8WZ82 227 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 CIDECQ96AQ7 238 aaPredicted RBP14.08□□□□□ -0.16
SCARB2-221ENST00000640341 NIPSNAP1Q9BPW8 284 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 RIOK2Q9BVS4 552 aaKnown RBP14.08□□□□□ -0.16
SCARB2-221ENST00000640341 ITPAQ9BY32 194 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 OR51B5Q9H339 312 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 ELAC1Q9H777 363 aaKnown RBP14.08□□□□□ -0.16
SCARB2-221ENST00000640341 GIN1Q9NXP7 522 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 PCDHGA6Q9Y5G7 932 aa14.08□□□□□ -0.16
SCARB2-221ENST00000640341 FAM227AF5H4B4 570 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 M0QX08 132 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 URODP06132 367 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 PDHA2P29803 388 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 KEAP1Q14145 624 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 ZC3H12BQ5HYM0 836 aaKnown RBP14.07□□□□□ -0.16
SCARB2-221ENST00000640341 C22orf39Q6P5X5 142 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 ZNF783Q6ZMS7 281 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 PLEKHG7Q6ZR37 379 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 MFSD4AQ8N468 514 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 FAM83FQ8NEG4 500 aaPredicted RBP14.07□□□□□ -0.16
SCARB2-221ENST00000640341 OR10G2Q8NGC3 310 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 ASZ1Q8WWH4 475 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 CORO1BQ9BR76 489 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 MARCH7Q9H992 704 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 RAB23Q9ULC3 237 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 DUSP12Q9UNI6 340 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 B3GNT3Q9Y2A9 372 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 PCDHB11Q9Y5F2 797 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 HOXA2O43364 376 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 INHAP05111 366 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 CHRM5P08912 532 aaPredicted RBP14.07□□□□□ -0.16
SCARB2-221ENST00000640341 SLC19A1P41440 591 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 TRPC1P48995 793 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 CTSCP53634 463 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 PROX2Q3B8N5 592 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.07□□□□□ -0.16
SCARB2-221ENST00000640341 HSD11B1LQ7Z5J1 315 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 TMEM25Q86YD3 366 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 HUS1BQ8NHY5 278 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 NFKBIDQ8NI38 313 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 APH1BQ8WW43 257 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 SLIRPQ9GZT3 109 aaKnown RBP14.07□□□□□ -0.16
SCARB2-221ENST00000640341 FAM83DQ9H4H8 585 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 ASIC5Q9NY37 505 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 CCL26Q9Y258 94 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 NAALAD2Q9Y3Q0 740 aa14.07□□□□□ -0.16
SCARB2-221ENST00000640341 GFRA2O00451 464 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 TLL1O43897 1013 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 CYP7B1O75881 506 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 C6orf47O95873 294 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 CBSLP0DN79 551 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 HLA-EP13747 358 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 GPX2P18283 190 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 CBSP35520 551 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 CHI3L1P36222 383 aaPredicted RBP14.06□□□□□ -0.16
SCARB2-221ENST00000640341 CTSKP43235 329 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 MAPK8P45983 427 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 RGNQ15493 299 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 SMU1Q2TAY7 513 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 PRSS48Q7RTY5 328 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 ZNF605Q86T29 641 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 CCDC103Q8IW40 242 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 DNAJB8Q8NHS0 232 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 RUVBL1Q9Y265 456 aaKnown RBP14.06□□□□□ -0.16
SCARB2-221ENST00000640341 TMED5Q9Y3A6 229 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 DOCK6Q96HP0 2047 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 TTC34A8MYJ7 566 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 KPNA5O15131 536 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 AQP9O43315 295 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 SCN2BO60939 215 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 SLC6A12P48065 614 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 HNMTP50135 292 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 RAB15P59190 212 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 PPIGQ13427 754 aaKnown RBP eCLIP14.06□□□□□ -0.16
SCARB2-221ENST00000640341 ZNF404Q494X3 552 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 C11orf74Q86VG3 221 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 NPAS3Q8IXF0 933 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 LGI4Q8N135 537 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 OR52E4Q8NGH9 312 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 CLP1Q92989 425 aaKnown RBP14.06□□□□□ -0.16
SCARB2-221ENST00000640341 KCNS3Q9BQ31 491 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 CCNB1IP1Q9NPC3 277 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 ATP11BQ9Y2G3 1177 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 RGS5O15539 181 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 CD40LGP29965 261 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 CRYBA2P53672 197 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 RPS26P62854 115 aaKnown RBP14.06□□□□□ -0.16
SCARB2-221ENST00000640341 KCNJ10P78508 379 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 EXOC3L2Q2M3D2 409 aa14.06□□□□□ -0.16
SCARB2-221ENST00000640341 RAVER1Q8IY67 606 aaKnown RBP14.06□□□□□ -0.16
SCARB2-221ENST00000640341 L3MBTL4Q8NA19 623 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms