RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 CAPNS1P04632 268 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 FGF4P08620 206 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 CYBAP13498 195 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 CBLP22681 906 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 PSMA3P25788 255 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 BMPR1AP36894 532 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 CTSKP43235 329 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 NFKB2Q00653 900 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 PMS2P3Q13401 168 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 EIF4EBP2Q13542 120 aaPredicted RBP8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 PTPRRQ15256 657 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 SGCBQ16585 318 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 ARMC4Q5T2S8 1044 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 XKR5Q6UX68 686 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 NLGN4XQ8N0W4 816 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 TMEM156Q8N614 296 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 GATSQ8NAP1 163 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 TMEM125Q96AQ2 219 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 TCEAL4Q96EI5 215 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 MYEOVQ96EZ4 313 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 ITCHQ96J02 903 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 PKMYT1Q99640 499 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 SPRTNQ9H040 489 aaPredicted RBP8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 HRASLS2Q9NWW9 162 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 GIN1Q9NXP7 522 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 SCML2Q9UQR0 700 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 SPO11Q9Y5K1 396 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 LOC285095A0A1B0GVY8 99 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 GPR39O43194 453 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 PSIP1O75475 530 aaKnown RBP8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 MYF6P23409 242 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 CAPGP40121 348 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 BTN3A2P78410 334 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 ZNF776Q68DI1 518 aaPredicted RBP8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 NANOGP8Q6NSW7 305 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 CD300LGQ6UXG3 332 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 MBOAT1Q6ZNC8 495 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 SLC34A3Q8N130 599 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 SCML4Q8N228 414 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 OR52B6Q8NGF0 335 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 NANOGQ9H9S0 305 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 SPHK2Q9NRA0 654 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 SEMA3GQ9NS98 782 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 ABCD2Q9UBJ2 740 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 GPR45Q9Y5Y3 372 aa8.02□□□□□ -1.13
PTPDC1-204ENST00000620992 PI15O43692 258 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 TULP3O75386 442 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 JMJD7P0C870 316 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 RFC2P35250 354 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 CLCN2P51788 898 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 OR4D2P58180 307 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 DEFA1P59665 94 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 DEFA3P59666 94 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 GANABQ14697 944 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 TOR1AIP1Q5JTV8 583 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 TMEM164Q5U3C3 297 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 TXNDC11Q6PKC3 985 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 TRAF7Q6Q0C0 670 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 TBC1D21Q8IYX1 336 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 ZCCHC7Q8N3Z6 543 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 C1orf52Q8N6N3 182 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 PACRGLQ8N7B6 248 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 COX18Q8N8Q8 333 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 RHEBL1Q8TAI7 183 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 UBASH3BQ8TF42 649 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 BIRC7Q96CA5 298 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 SLC39A13Q96H72 371 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 ZNF607Q96SK3 696 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 SLC30A3Q99726 388 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 CDADC1Q9BWV3 514 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 NAA50Q9GZZ1 169 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 NUAK2Q9H093 628 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 RPF2Q9H7B2 306 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 IL23AQ9NPF7 189 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 DNAAF2Q9NVR5 837 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 MAGED1Q9Y5V3 778 aaPredicted RBP8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 OAS3Q9Y6K5 1087 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 ZNF236Q9UL36 1845 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 ZNF840PA6NDX5 716 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 RASAL1O95294 804 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 UROSP10746 265 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 ELK4P28324 431 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 IFNGR2P38484 337 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 ARF5P84085 180 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 RAB39AQ14964 217 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 ATP6AP1Q15904 470 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 CLEC12AQ5QGZ9 265 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 C8orf82Q6P1X6 216 aaPredicted RBP8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 SPATA19Q7Z5L4 167 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 LRRTM4Q86VH4 590 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 FUBP1Q96AE4 644 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 NYNRINQ9P2P1 1898 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 WASH4PA8MWX3 477 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 LAMTOR5O43504 91 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 B4GALT3O60512 393 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 ATE1O95260 518 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 OGNP20774 298 aaKnown RBP8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 CSTF2P33240 577 aaKnown RBP eCLIP8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 TM4SF4P48230 202 aa8.01□□□□□ -1.13
PTPDC1-204ENST00000620992 CDH12P55289 794 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms