RNA–Protein interactions for RNA: ENST00000619160.4

PCSK6-218, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-218ENST00000619160 COL21A1Q96P44 957 aa22.36■■□□□ 1.17
PCSK6-218ENST00000619160 RPRD1BQ9NQG5 326 aaKnown RBP22.36■■□□□ 1.17
PCSK6-218ENST00000619160 MS4A12Q9NXJ0 267 aa22.36■■□□□ 1.17
PCSK6-218ENST00000619160 SLC45A1Q9Y2W3 748 aa22.36■■□□□ 1.17
PCSK6-218ENST00000619160 AKR1A1P14550 325 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 PSMA3P25788 255 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 MAGEA11P43364 429 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 HTR3AP46098 478 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 SPIBQ01892 262 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 UGT8Q16880 541 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 SLX4IPQ5VYV7 408 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 CMTM7Q96FZ5 175 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 OR5M11Q96RB7 305 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 CCDC177Q9NQR7 707 aaPredicted RBP22.35■■□□□ 1.17
PCSK6-218ENST00000619160 MKLN1Q9UL63 735 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 GLYATL1P3A0A0U1RQE8 302 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 LAMP1P11279 417 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 HOXB9P17482 250 aaPredicted RBP22.35■■□□□ 1.17
PCSK6-218ENST00000619160 POU1F1P28069 291 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 ARMC4Q5T2S8 1044 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 FAM20CQ8IXL6 584 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 MED30Q96HR3 178 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 GPR62Q9BZJ7 368 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 GBF1Q92538 1859 aa22.35■■□□□ 1.17
PCSK6-218ENST00000619160 A0A1B0GVM2 712 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 HIST1H2AGP0C0S8 130 aaPredicted RBP22.34■■□□□ 1.17
PCSK6-218ENST00000619160 HIST1H2ADP20671 130 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 PRPS1L1P21108 318 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 PPIGQ13427 754 aaKnown RBP eCLIP22.34■■□□□ 1.172e-9■□□□□ 10.5
PCSK6-218ENST00000619160 MADCAM1Q13477 382 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 TAB1Q15750 504 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 TBRG1Q3YBR2 411 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 ZNF544Q6NX49 715 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 GTPBP3Q969Y2 492 aaKnown RBP22.34■■□□□ 1.17
PCSK6-218ENST00000619160 HIST1H2AHQ96KK5 128 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 COPS8Q99627 209 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 HIST1H2AJQ99878 128 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 NIPSNAP1Q9BPW8 284 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 H2AFJQ9BTM1 129 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 SLC6A14Q9UN76 642 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 GREB1Q4ZG55 1949 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 CD160O95971 181 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 AMD1P17707 334 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 ACRV1P26436 265 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 LRRC26Q2I0M4 334 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 TRIM60Q495X7 471 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 CLLU1OSQ5K130 101 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 FAM124AQ86V42 546 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 CCM2Q9BSQ5 444 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 PATJQ8NI35 1801 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 NT5C1B-RDH14C9J2C7 533 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 GAPDHSO14556 408 aaPredicted RBP22.34■■□□□ 1.17
PCSK6-218ENST00000619160 GPX2P18283 190 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 BOP1Q14137 746 aaKnown RBP22.34■■□□□ 1.17
PCSK6-218ENST00000619160 RSPO2Q6UXX9 243 aaPredicted RBP22.34■■□□□ 1.17
PCSK6-218ENST00000619160 C7orf34Q96L11 122 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 FYTTD1Q96QD9 318 aaKnown RBP22.34■■□□□ 1.17
PCSK6-218ENST00000619160 SLC30A2Q9BRI3 323 aa22.34■■□□□ 1.17
PCSK6-218ENST00000619160 CCDC59Q9P031 241 aaKnown RBP22.34■■□□□ 1.17
PCSK6-218ENST00000619160 KCNJ10P78508 379 aa22.33■■□□□ 1.17
PCSK6-218ENST00000619160 FRG2Q64ET8 278 aa22.33■■□□□ 1.17
PCSK6-218ENST00000619160 ANKS3Q6ZW76 656 aa22.33■■□□□ 1.17
PCSK6-218ENST00000619160 OR9Q2Q8NGE9 314 aa22.33■■□□□ 1.17
PCSK6-218ENST00000619160 FRG2BQ96QU4 278 aa22.33■■□□□ 1.17
PCSK6-218ENST00000619160 CNPPD1Q9BV87 410 aa22.33■■□□□ 1.17
PCSK6-218ENST00000619160 COQ3Q9NZJ6 369 aa22.33■■□□□ 1.17
PCSK6-218ENST00000619160 TEX28O15482 410 aa22.33■■□□□ 1.16
PCSK6-218ENST00000619160 SEMG1P04279 462 aa22.33■■□□□ 1.16
PCSK6-218ENST00000619160 ACPPP15309 386 aa22.33■■□□□ 1.16
PCSK6-218ENST00000619160 HTR2BP41595 481 aa22.33■■□□□ 1.16
PCSK6-218ENST00000619160 CRATP43155 626 aa22.33■■□□□ 1.16
PCSK6-218ENST00000619160 SMARCB1Q12824 385 aa22.33■■□□□ 1.16
PCSK6-218ENST00000619160 CHIT1Q13231 466 aa22.33■■□□□ 1.16
PCSK6-218ENST00000619160 LRRC66Q68CR7 880 aa22.33■■□□□ 1.16
PCSK6-218ENST00000619160 PRR23CQ6ZRP0 262 aa22.33■■□□□ 1.16
PCSK6-218ENST00000619160 USP50Q70EL3 339 aaPredicted RBP22.33■■□□□ 1.16
PCSK6-218ENST00000619160 LGI4Q8N135 537 aa22.33■■□□□ 1.16
PCSK6-218ENST00000619160 JPH3Q8WXH2 748 aaPredicted RBP22.33■■□□□ 1.16
PCSK6-218ENST00000619160 YY2O15391 372 aa22.32■■□□□ 1.16
PCSK6-218ENST00000619160 TRBC1P01850 177 aa22.32■■□□□ 1.16
PCSK6-218ENST00000619160 BPIP17213 487 aa22.32■■□□□ 1.16
PCSK6-218ENST00000619160 B3GNT7Q8NFL0 401 aa22.32■■□□□ 1.16
PCSK6-218ENST00000619160 EPYCQ99645 322 aa22.32■■□□□ 1.16
PCSK6-218ENST00000619160 MGLLQ99685 303 aa22.32■■□□□ 1.16
PCSK6-218ENST00000619160 GABARAPL3Q9BY60 117 aa22.32■■□□□ 1.16
PCSK6-218ENST00000619160 RERGLQ9H628 205 aa22.32■■□□□ 1.16
PCSK6-218ENST00000619160 SH3BP4Q9P0V3 963 aa22.32■■□□□ 1.16
PCSK6-218ENST00000619160 LHX3Q9UBR4 397 aa22.32■■□□□ 1.16
PCSK6-218ENST00000619160 AOC2O75106 756 aa22.32■■□□□ 1.16
PCSK6-218ENST00000619160 CPNE3O75131 537 aaKnown RBP22.32■■□□□ 1.16
PCSK6-218ENST00000619160 RPS3P23396 243 aaKnown RBP eCLIP22.32■■□□□ 1.163e-7■■□□□ 11.9
PCSK6-218ENST00000619160 WDR36Q8NI36 951 aaKnown RBP22.32■■□□□ 1.16
PCSK6-218ENST00000619160 CSGALNACT1Q8TDX6 532 aa22.32■■□□□ 1.16
PCSK6-218ENST00000619160 UBTD2Q8WUN7 234 aa22.32■■□□□ 1.16
PCSK6-218ENST00000619160 ST6GAL2Q96JF0 529 aa22.32■■□□□ 1.16
PCSK6-218ENST00000619160 TRNT1Q96Q11 434 aaKnown RBP22.32■■□□□ 1.16
PCSK6-218ENST00000619160 ZNF556Q9HAH1 456 aa22.32■■□□□ 1.16
PCSK6-218ENST00000619160 A3GALT2U3KPV4 340 aa22.32■■□□□ 1.16
PCSK6-218ENST00000619160 TDRD15B5MCY1 1934 aaKnown RBP22.32■■□□□ 1.16
PCSK6-218ENST00000619160 SLC38A8A6NNN8 435 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms