RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 RPP25Q9BUL9 199 aaKnown RBP11.38□□□□□ -0.59
PPP4R3B-204ENST00000612688 C12orf4Q9NQ89 552 aa11.38□□□□□ -0.59
PPP4R3B-204ENST00000612688 FBXO8Q9NRD0 319 aa11.38□□□□□ -0.59
PPP4R3B-204ENST00000612688 NUFIP1Q9UHK0 495 aaKnown RBP11.38□□□□□ -0.59
PPP4R3B-204ENST00000612688 SATB2Q9UPW6 733 aa11.38□□□□□ -0.59
PPP4R3B-204ENST00000612688 ANKRD66B4E2M5 251 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 SMLR1H3BR10 107 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 GFRA2O00451 464 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 SEC22BO75396 215 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 SEMA3DO95025 777 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 MATN4O95460 622 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 SERPINA1P01009 418 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 UROSP10746 265 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 SRCP12931 536 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 HOXA9P31269 272 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 UQCRC1P31930 480 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 KRT6CP48668 564 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 IL2P60568 153 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 PPP2R2BQ00005 443 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 ALDH6A1Q02252 535 aaKnown RBP11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 EMX2Q04743 252 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 BCL2L1Q07817 233 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 RAB30Q15771 203 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 AGAP6Q5VW22 663 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 DPY19L3Q6ZPD9 716 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 EFL1Q7Z2Z2 1120 aaKnown RBP11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 GOLGA7Q7Z5G4 137 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 LIX1Q8N485 282 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 OR56A4Q8NGH8 313 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 OR6F1Q8NGZ6 308 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 NETO1Q8TDF5 533 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 CEP19Q96LK0 163 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 SAMD11Q96NU1 681 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 AGAP4Q96P64 663 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 INPP5KQ9BT40 448 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 GPR63Q9BZJ6 419 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 SFXN1Q9H9B4 322 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 ANKRD36A6QL64 1941 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 WASH3PC4AMC7 463 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 RGS13O14921 159 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 AIREO43918 545 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 TSPAN9O75954 239 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 TSPAN12O95859 305 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 FGF1P05230 155 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 RPS17P08708 135 aaKnown RBP11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 HLA-EP13747 358 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 HLA-DPA1P20036 260 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 CDK10Q15131 360 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 SYCE2Q6PIF2 218 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 ZFAND4Q86XD8 727 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 RIMKLAQ8IXN7 391 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 CELF5Q8N6W0 485 aaKnown RBP11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 PIK3C3Q8NEB9 887 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 CD200R1Q8TD46 325 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 PIK3R3Q92569 461 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 BTBD2Q9BX70 525 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 SLC7A5P2Q9GIP4 190 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 SYTL2Q9HCH5 934 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 SLC25A37Q9NYZ2 338 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 OPTCQ9UBM4 332 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 BTBD3Q9Y2F9 522 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 SMIM30A4D0T7 59 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 CDK2AP1O14519 115 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 VPS26AO75436 327 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 FGF19O95750 216 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 CYP17A1P05093 508 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 UMPSP11172 480 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 PKMP14618 531 aaKnown RBP11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 GADD45AP24522 165 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 NUDT6P53370 316 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 POU6F2P78424 691 aaPredicted RBP11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 NFKB2Q00653 900 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 MAPKAPK3Q16644 382 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 ZNF648Q5T619 568 aaPredicted RBP11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 NCEH1Q6PIU2 408 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 PTRH1Q86Y79 214 aaKnown RBP11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 FAM217AQ8IXS0 508 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 KLHDC8BQ8IXV7 354 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 ANKK1Q8NFD2 765 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 SNAPC3Q92966 411 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 EGLN2Q96KS0 407 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 PPP1R2P1Q96PQ5 205 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 DPH2Q9BQC3 489 aaPredicted RBP11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 CCDC177Q9NQR7 707 aaPredicted RBP11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 KLHL20Q9Y2M5 609 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 PCDHGA10Q9Y5H3 936 aa11.37□□□□□ -0.59
PPP4R3B-204ENST00000612688 A0A096LPI6 279 aa11.36□□□□□ -0.59
PPP4R3B-204ENST00000612688 A0A0X1KG70 313 aa11.36□□□□□ -0.59
PPP4R3B-204ENST00000612688 M0R129 80 aa11.36□□□□□ -0.59
PPP4R3B-204ENST00000612688 OR7A17O14581 309 aa11.36□□□□□ -0.59
PPP4R3B-204ENST00000612688 STX7O15400 261 aaKnown RBP11.36□□□□□ -0.59
PPP4R3B-204ENST00000612688 ADH5P11766 374 aa11.36□□□□□ -0.59
PPP4R3B-204ENST00000612688 ATF4P18848 351 aaPredicted RBP11.36□□□□□ -0.59
PPP4R3B-204ENST00000612688 DDX6P26196 483 aaKnown RBP eCLIP11.36□□□□□ -0.594e-9■■■■■ 29
PPP4R3B-204ENST00000612688 C21orf33P30042 268 aaPredicted RBP11.36□□□□□ -0.59
PPP4R3B-204ENST00000612688 WASP42768 502 aa11.36□□□□□ -0.59
PPP4R3B-204ENST00000612688 CDK5R2Q13319 367 aa11.36□□□□□ -0.59
PPP4R3B-204ENST00000612688 SLC14A1Q13336 389 aa11.36□□□□□ -0.59
PPP4R3B-204ENST00000612688 CRY1Q16526 586 aa11.36□□□□□ -0.59
PPP4R3B-204ENST00000612688 CYP27C1Q4G0S4 372 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms