RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 FAM71F1Q96KD3 344 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 FCRL2Q96LA5 508 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 LRFN5Q96NI6 719 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 ZNF347Q96SE7 839 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 PSMB7Q99436 277 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 OR2AG1Q9H205 316 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 MMP25Q9NPA2 562 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 PRMT8Q9NR22 394 aaPredicted RBP4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 FBXO28Q9NVF7 368 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 GRHL1Q9NZI5 618 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 NCKAP1Q9Y2A7 1128 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 NEU2Q9Y3R4 380 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 UGT2A1Q9Y4X1 527 aa4.86□□□□□ -1.63
SPTBN1-206ENST00000602898 MYH4Q9Y623 1939 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 NCAPD2Q15021 1401 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 MTMR11A4FU01 709 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 TMEM210A6NLX4 147 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 OR52A4PA6NMU1 304 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 I3L4J1 428 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 GYG2O15488 501 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 NUPL2O15504 423 aaKnown RBP4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 DHX15O43143 795 aaKnown RBP4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 PRSS23O95084 383 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 VAMP5O95183 116 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 PLS3P13797 630 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 PRKCHP24723 683 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 IL12RB1P42701 662 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 RAP1GAPP47736 663 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 FNTBP49356 437 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 EFNA5P52803 228 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 SOX8P57073 446 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 KCNMA1Q12791 1236 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 MERTKQ12866 999 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 ILKQ13418 452 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 PPIGQ13427 754 aaKnown RBP eCLIP4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 TRIP13Q15645 432 aaPredicted RBP4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 DLG2Q15700 870 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 PDK4Q16654 411 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 SLC9C1Q4G0N8 1177 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 YIF1BQ5BJH7 314 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 PCID2Q5JVF3 399 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 MBLAC2Q68D91 279 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 FAM109BQ6ICB4 259 aaPredicted RBP4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 HMBOX1Q6NT76 420 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 C5orf46Q6UWT4 87 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 RTL4Q6ZR62 310 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 LINC00299Q6ZSB3 139 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 TDRPQ86YL5 185 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 UBQLNLQ8IYU4 475 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 GPR137CQ8N3F9 429 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 DAGLBQ8NCG7 672 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 OR52J3Q8NH60 311 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 TCP10LQ8TDR4 215 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 UFD1Q92890 307 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 COPS5Q92905 334 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 C12orf43Q96C57 262 aaKnown RBP4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 RHBDF1Q96CC6 855 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 SLC41A2Q96JW4 573 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 PCYT2Q99447 389 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 SLC19A3Q9BZV2 496 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 KCMF1Q9P0J7 381 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 DNMT3BQ9UBC3 853 aaKnown RBP4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 PISDQ9UG56 409 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 STOML2Q9UJZ1 356 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 SNX24Q9Y343 169 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 AP4S1Q9Y587 144 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 MON2Q7Z3U7 1717 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 A0A0G2JMP0 313 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 PIPSLA2A3N6 862 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 CLCA1A8K7I4 914 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 UBE2Q2LH0YL09 131 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 DEAF1O75398 565 aaPredicted RBP4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 CBX6O95503 412 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 DHFRP00374 187 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 FABP1P07148 127 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 CHRM2P08172 466 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 CELA2BP08218 269 aaPredicted RBP4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 STSP08842 583 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 IFNGR1P15260 489 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 NQO2P16083 231 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 ARNTP27540 789 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 PIK3R1P27986 724 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 OXTRP30559 389 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 VIPR1P32241 457 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 HPCAL1P37235 193 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 MEOX2P50222 304 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 TPMTP51580 245 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 NDST1P52848 882 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 PSMD4P55036 377 aaKnown RBP4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 DCDC1P59894 354 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 GLO1Q04760 184 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 TUBB3Q13509 450 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 DYRK1AQ13627 763 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 CAPRIN1Q14444 709 aaKnown RBP4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 NAB2Q15742 525 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 SLC5A12Q1EHB4 618 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 MTHFSDQ2M296 383 aaKnown RBP4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 ZBED5Q49AG3 693 aa4.85□□□□□ -1.63
SPTBN1-206ENST00000602898 TEX30Q5JUR7 227 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms