RNA–Protein interactions for RNA: ENST00000601697.5

PSMC4-206, Transcript of proteasome 26S subunit, ATPase 4, human

TSL 2

Gene PSMC4, Length 1,623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC4-206	ENST00000601697	RGS10	O43665	173 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	FOXD2	O60548	495 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	PRAMEF4	O60810	478 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	SCN2B	O60939	215 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	MITF	O75030	526 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	FAM20B	O75063	409 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	CA3	P07451	260 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	PCGF2	P35227	344 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	GRK3	P35626	688 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	RPL3	P39023	403 aa	Known RBP	13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	ST13	P50502	369 aa	Known RBP	13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	GP2	P55259	537 aa	Known RBP	13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	DDX39B	Q13838	428 aa	Known RBP	13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	DHCR24	Q15392	516 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	NPTX1	Q15818	432 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	PRAMEF9	Q5VWM5	478 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	TMEM215	Q68D42	235 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	SLC16A12	Q6ZSM3	486 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	B3GNT8	Q7Z7M8	397 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	CYP4Z1	Q86W10	505 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	PTOV1	Q86YD1	416 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	NPAS3	Q8IXF0	933 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	CHPT1	Q8WUD6	406 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	SMG7	Q92540	1137 aa	Known RBP	13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	SGCD	Q92629	289 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	MED8	Q96G25	268 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	MRGPRX3	Q96LB0	322 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	VPS35	Q96QK1	796 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	CSF3R	Q99062	836 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	PITX2	Q99697	317 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	TPT1P8	Q9HAU6	139 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	LTB4R2	Q9NPC1	389 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	STOX2	Q9P2F5	926 aa	Predicted RBP	13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	NDRG4	Q9ULP0	352 aa	Known RBP	13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	PDE4DIP	Q5VU43	2346 aa		13.6	□□□□□ -0.23
PSMC4-206	ENST00000601697	CLDN25	C9JDP6	229 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697		M0R3G1	203 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	MAGEB3	O15480	346 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	SUV39H1	O43463	412 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	INMT	O95050	263 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	CYP17A1	P05093	508 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	ABCB1	P08183	1280 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	ANXA4	P09525	319 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	ADH5	P11766	374 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	CLK3	P49761	638 aa	Known RBP	13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	SLC35A2	P78381	396 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	EMX1	Q04741	257 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	PIGF	Q07326	219 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	NAE1	Q13564	534 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	SIM2	Q14190	667 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	SPCS2	Q15005	226 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	DGUOK	Q16854	277 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	ANKDD1A	Q495B1	522 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	CEP68	Q76N32	757 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	ZNF551	Q7Z340	670 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	HSD11B1L	Q7Z5J1	315 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	ADGRD2	Q7Z7M1	963 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	SLC15A4	Q8N697	577 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	TMCO5A	Q8N6Q1	288 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	KIAA1958	Q8N8K9	716 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	C11orf65	Q8NCR3	313 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	ABHD11	Q8NFV4	315 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	OR10Q1	Q8NGQ4	319 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	HCAR2	Q8TDS4	363 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	WFIKKN2	Q8TEU8	576 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	CYB5D2	Q8WUJ1	264 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	FCGR1B	Q92637	280 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	MTERF1	Q99551	399 aa	Known RBP	13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	CCM2	Q9BSQ5	444 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	ATAD3A	Q9NVI7	634 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	THUMPD1	Q9NXG2	353 aa	Known RBP	13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	ERVK-18	Q9QC07	812 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	FZD4	Q9ULV1	537 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	ERGIC3	Q9Y282	383 aa		13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	YBX2	Q9Y2T7	364 aa	Known RBP	13.59	□□□□□ -0.23
PSMC4-206	ENST00000601697	TTC34	A8MYJ7	566 aa		13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	KPNA4	O00629	521 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	HOXC11	O43248	304 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	XPNPEP2	O43895	674 aa		13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	MTX2	O75431	263 aa		13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	B3GALT4	O96024	378 aa		13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	ADH1C	P00326	375 aa		13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	CYP4B1	P13584	511 aa		13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	CD22	P20273	847 aa		13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	WEE1	P30291	646 aa		13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	TIA1	P31483	386 aa	Known RBP eCLIP	13.58	□□□□□ -0.24	9e-11	■■■■□ 19.7
PSMC4-206	ENST00000601697	FMO3	P31513	532 aa		13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	PBX2	P40425	430 aa		13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	DGKG	P49619	791 aa		13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	PRLHR	P49683	370 aa		13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	VLDLR	P98155	873 aa		13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	ELOA	Q14241	798 aa	Known RBP	13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	CTF1	Q16619	201 aa		13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	PROX2	Q3B8N5	592 aa		13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	LRRC73	Q5JTD7	316 aa		13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	SYT6	Q5T7P8	510 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	HENMT1	Q5T8I9	393 aa	Known RBP	13.58	□□□□□ -0.24
PSMC4-206	ENST00000601697	MED27	Q6P2C8	311 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms