RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 IL1RNP18510 177 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 GCAP28676 217 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 KLC1Q07866 573 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 C19orf57Q0VDD7 668 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 CDC16Q13042 620 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 DSG2Q14126 1118 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 FAM53BQ14153 422 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 RBBP5Q15291 538 aaKnown RBP17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 NDUFA9Q16795 377 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 CDKL4Q5MAI5 379 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 PRAMEF9Q5VWM5 478 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 SLCO4C1Q6ZQN7 724 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 TRMT10CQ7L0Y3 403 aaKnown RBP17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 LAPTM4BQ86VI4 370 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 C9orf43Q8TAL5 461 aaPredicted RBP17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 MIEF2Q96C03 454 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 MVB12AQ96EY5 273 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 GPR78Q96P69 363 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 EPB41L4BQ9H329 900 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 ACSS2Q9NR19 701 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 DNAJC11Q9NVH1 559 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 ZNF358Q9NW07 568 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 TRPC4Q9UBN4 977 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 IKBKGQ9Y6K9 419 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 MED13Q9UHV7 2174 aa17.72■□□□□ 0.43
PPP4R1-215ENST00000580182 IGLV3-12A0A075B6K2 115 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 EXOC1LA0A1B0GW35 172 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 CCNT2O60583 730 aaKnown RBP17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 STK16O75716 305 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 KLHL2O95198 593 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 B3GALT4O96024 378 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 S100BP04271 92 aaPredicted RBP17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 ABHD2P08910 425 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 C1GALT1C1LP0DN25 315 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 MTHFD2P13995 350 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 GNAZP19086 355 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 MAGEA12P43365 314 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 AGTR2P50052 363 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 SERPINB9P50453 376 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 OCA2Q04671 838 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 FAM83EQ2M2I3 478 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 PTRH1Q86Y79 214 aaKnown RBP17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 PDSS2Q86YH6 399 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 SNX31Q8N9S9 440 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 ISL2Q96A47 359 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 AIF1LQ9BQI0 150 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 CNOT10Q9H9A5 744 aaKnown RBP17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 P4HTMQ9NXG6 502 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 NUDT4Q9NZJ9 180 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 ZFP69BQ9UJL9 534 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 ZNF180Q9UJW8 692 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 NXT1Q9UKK6 140 aaKnown RBP17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 TP53TG5Q9Y2B4 290 aa17.71■□□□□ 0.43
PPP4R1-215ENST00000580182 SCN3AQ9NY46 2000 aa17.71■□□□□ 0.42
PPP4R1-215ENST00000580182 A6NL46 340 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 TRIM49D1C9J1S8 452 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 MKRN2OSH3BPM6 223 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 SGK494L7N484 410 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 SOCS6O14544 535 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 ZNF500O60304 480 aaPredicted RBP17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 ALOX12BO75342 701 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 IPO13O94829 963 aaKnown RBP17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 NSA2O95478 260 aaKnown RBP17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 PDGFAP04085 211 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 SLC35G6P0C7Q6 338 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 EPORP19235 508 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 MMP11P24347 488 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 AVPR1BP47901 424 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 SLBPQ14493 270 aaKnown RBP eCLIP17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 SLC29A2Q14542 456 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 ACAP2Q15057 778 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 ATG9BQ674R7 924 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 MED25Q71SY5 747 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 CCDC91Q7Z6B0 441 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 TMEM102Q8N9M5 508 aaPredicted RBP17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 RHEBL1Q8TAI7 183 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 CRB3Q9BUF7 120 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 CD244Q9BZW8 370 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 MAP4K5Q9Y4K4 846 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 HS3ST3B1Q9Y662 390 aa17.7■□□□□ 0.42
PPP4R1-215ENST00000580182 B8ZZF3 427 aa17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 PEX12O00623 359 aa17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 MAP2K7O14733 419 aa17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 PRPF4O43172 522 aaKnown RBP eCLIP17.69■□□□□ 0.421e-6■■■□□ 18.5
PPP4R1-215ENST00000580182 DNAJB6O75190 326 aa17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 KRT38O76015 456 aa17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 AHRP35869 848 aa17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 EFNA3P52797 238 aa17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 HYAL2Q12891 473 aa17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 PWP1Q13610 501 aa17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 RAPSNQ13702 412 aa17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 PDK4Q16654 411 aa17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 ZC3H7AQ8IWR0 971 aaKnown RBP17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 TBC1D19Q8N5T2 526 aa17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 NT5CQ8TCD5 201 aa17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 AICDAQ9GZX7 198 aa17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 ANKZF1Q9H8Y5 726 aa17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 ANKHQ9HCJ1 492 aa17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 GPRC5BQ9NZH0 403 aa17.69■□□□□ 0.42
PPP4R1-215ENST00000580182 HCN3Q9P1Z3 774 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms