RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 ITGA8P53708 1063 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 TAP2Q03519 686 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 ACTN3Q08043 901 aaPredicted RBP11.75□□□□□ -0.53
PSEN1-221ENST00000557293 GXYLT1Q4G148 440 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 ANKRD20A4Q4UJ75 823 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 CTSL3PQ5NE16 218 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 PTRHD1Q6GMV3 140 aaKnown RBP11.75□□□□□ -0.53
PSEN1-221ENST00000557293 RTL6Q6ICC9 239 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 TMEM214Q6NUQ4 689 aaKnown RBP11.75□□□□□ -0.53
PSEN1-221ENST00000557293 ZZZ3Q8IYH5 903 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 CLYBLQ8N0X4 340 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 ZFP62Q8NB50 900 aaPredicted RBP11.75□□□□□ -0.53
PSEN1-221ENST00000557293 PPFIBP2Q8ND30 876 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 NFAM1Q8NET5 270 aaPredicted RBP11.75□□□□□ -0.53
PSEN1-221ENST00000557293 MAGEC3Q8TD91 643 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 RERGQ96A58 199 aaPredicted RBP11.75□□□□□ -0.53
PSEN1-221ENST00000557293 LRRC45Q96CN5 670 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 TM4SF19Q96DZ7 209 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 BIRC8Q96P09 236 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 LPAR4Q99677 370 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 SLC24A3Q9HC58 644 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 ABHD10Q9NUJ1 306 aa11.75□□□□□ -0.53
PSEN1-221ENST00000557293 KCNE1BA0A087WTH5 132 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 MACROD2A1Z1Q3 448 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 USP27XA6NNY8 438 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 MAGEB17A8MXT2 336 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 H7BY64 318 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 TFECO14948 347 aaPredicted RBP11.74□□□□□ -0.53
PSEN1-221ENST00000557293 KPNA5O15131 536 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 CDC40O60508 579 aaKnown RBP eCLIP11.74□□□□□ -0.53
PSEN1-221ENST00000557293 PSIP1O75475 530 aaKnown RBP11.74□□□□□ -0.53
PSEN1-221ENST00000557293 DNASE1P24855 282 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 PPARGP37231 505 aaPredicted RBP11.74□□□□□ -0.53
PSEN1-221ENST00000557293 PNLIPRP1P54315 467 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 TAS2R50P59544 299 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 CDH17Q12864 832 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 ARHGAP19Q14CB8 494 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 ABRAXAS2Q15018 415 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 NSDHLQ15738 373 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 C11orf63Q6NUN7 778 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 ARSKQ6UWY0 536 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 ACAD11Q709F0 780 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 OTOAQ7RTW8 1153 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 MDGA2Q7Z553 956 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 LINC00523Q86TU6 105 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 CDC20BQ86Y33 519 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 KRTAP1-3Q8IUG1 177 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 ZNF480Q8WV37 535 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 SKA2Q8WVK7 121 aaPredicted RBP11.74□□□□□ -0.53
PSEN1-221ENST00000557293 NANOS1Q8WY41 292 aaKnown RBP11.74□□□□□ -0.53
PSEN1-221ENST00000557293 ALG3Q92685 438 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 PRAP1Q96NZ9 151 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 PANX3Q96QZ0 392 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 DEFB127Q9H1M4 99 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 DEPPQ9NTK1 212 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 TSR3Q9UJK0 312 aaKnown RBP11.74□□□□□ -0.53
PSEN1-221ENST00000557293 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.74□□□□□ -0.53
PSEN1-221ENST00000557293 TCAF1Q9Y4C2 921 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 FAM215AQ9Y5M1 114 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 NSD1Q96L73 2696 aaPredicted RBP11.74□□□□□ -0.53
PSEN1-221ENST00000557293 HRNRQ86YZ3 2850 aaPredicted RBP11.74□□□□□ -0.53
PSEN1-221ENST00000557293 DNAJC13O75165 2243 aa11.74□□□□□ -0.53
PSEN1-221ENST00000557293 PINLYPA6NC86 204 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 CD3EAPO15446 510 aaKnown RBP11.73□□□□□ -0.53
PSEN1-221ENST00000557293 LCMT2O60294 686 aaKnown RBP11.73□□□□□ -0.53
PSEN1-221ENST00000557293 PRMT3O60678 531 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 RDH16O75452 317 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 SLC16A8O95907 504 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 MBD3O95983 291 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 GLI4P10075 376 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 HOXC12P31275 282 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 MAGEA1P43355 309 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 OR4D2P58180 307 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 ABATP80404 500 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 MPP1Q00013 466 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 TSTA3Q13630 321 aaPredicted RBP11.73□□□□□ -0.53
PSEN1-221ENST00000557293 JMJD1CQ15652 2540 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 ACSBG2Q5FVE4 666 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 ARHGAP11AQ6P4F7 1023 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 KCT2Q8NC54 265 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 GSDMBQ8TAX9 411 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 SLC35B2Q8TB61 432 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 TMEM125Q96AQ2 219 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 PEX11GQ96HA9 241 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 MRFAP1L1Q96HT8 127 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 C18orf12Q96KH6 178 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 FOPNLQ96NB1 174 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 TTYH2Q9BSA4 534 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 CLEC4MQ9H2X3 399 aaPredicted RBP11.73□□□□□ -0.53
PSEN1-221ENST00000557293 ETNK1Q9HBU6 452 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 CHRAC1Q9NRG0 131 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 PNPLA3Q9NST1 481 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 CATSPERZQ9NTU4 200 aa11.73□□□□□ -0.53
PSEN1-221ENST00000557293 ZNHIT6Q9NWK9 470 aaKnown RBP11.73□□□□□ -0.53
PSEN1-221ENST00000557293 KLF13Q9Y2Y9 288 aaPredicted RBP11.73□□□□□ -0.53
PSEN1-221ENST00000557293 A0A0G2JNJ9 132 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 NPIPA2E9PIF3 369 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 NPIPA3F8WFD2 350 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 KLRC4-KLRK1H3BQV0 150 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 NIPSNAP2O75323 286 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms