RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 Q6ZVU0 165 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 DNAJA4Q8WW22 397 aaPredicted RBP3.21□□□□□ -1.89
SYNE2-212ENST00000554584 NTMT1Q9BV86 223 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 SPACA1Q9HBV2 294 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 PPP4R1LQ9P1A2 415 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 MGAT4CQ9UBM8 478 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 ARHGEF12Q9NZN5 1544 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 PHLPP1O60346 1717 aa3.21□□□□□ -1.89
SYNE2-212ENST00000554584 DLGAP1O14490 977 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PAGE1O75459 146 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 SCGB2A1O75556 95 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 AHSA1O95433 338 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 MLYCDO95822 493 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 SMPD1P17405 629 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 BMP7P18075 431 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PGM2L1Q6PCE3 622 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF836Q6ZNA1 936 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 EXOC3L1Q86VI1 746 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 SVOPQ8N4V2 548 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 MFSD2AQ8NA29 543 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 HSD17B8Q92506 261 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 DCAF16Q9NXF7 216 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 MARCH4Q9P2E8 410 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ASTN1O14525 1302 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PNPLA7Q6ZV29 1317 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 A0A087WXM4 84 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 LCHNA4D1U4 455 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 SLC2A2P11168 524 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 RPS3P23396 243 aaKnown RBP eCLIP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PTX3P26022 381 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 HSPA7P48741 367 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ACLYP53396 1101 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 TGFBR3Q03167 851 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ANKS1AQ92625 1134 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 NUDT22Q9BRQ3 303 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 TMEM121BQ9BXQ6 578 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ANKZF1Q9H8Y5 726 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ACSL6Q9UKU0 697 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 RNF150Q9ULK6 438 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 GGT3PA6NGU5 568 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ERBB2P04626 1255 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 NEK3P51956 506 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 RAB2AP61019 212 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 TMEM179BQ7Z7N9 219 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PPP1R2P1Q96PQ5 205 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PDCD2LQ9BRP1 358 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 WDR18Q9BV38 432 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF442Q9H7R0 627 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 CCNB1IP1Q9NPC3 277 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 WASF3Q9UPY6 502 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 AKAP11Q9UKA4 1901 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 A0A1W2PP55 124 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 FSCN2O14926 492 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 SEC24AO95486 1093 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 NAA10P41227 235 aaPredicted RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PPP3R1P63098 170 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 SEMA3BQ13214 749 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ALG10Q5BKT4 473 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 FAM205BPQ63HN1 556 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 KDELC1Q6UW63 502 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 AHSA2Q719I0 299 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PSTKQ8IV42 348 aaKnown RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 OR2T27Q8NH04 317 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PHOSPHO1Q8TCT1 267 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 RCN3Q96D15 328 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 TSPAN18Q96SJ8 248 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 TBL1XR1Q9BZK7 514 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ISCUQ9H1K1 167 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 CDT1Q9H211 546 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 GFOD1Q9NXC2 390 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 GPR160Q9UJ42 338 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 CLTCL1P53675 1640 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ADAM17P78536 824 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PPIL2Q13356 520 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 RBM48Q5RL73 367 aaKnown RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 AKAP14Q86UN6 197 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 WFDC3Q8IUB2 231 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 KRT35Q92764 455 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 BORCS6Q96GS4 357 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 LMF1Q96S06 567 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 TM9SF3Q9HD45 589 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ANKMY1Q9P2S6 941 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ZNF69Q9UC07 566 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 AP3M1Q9Y2T2 418 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 DLG5Q8TDM6 1919 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 M0R129 80 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ATE1O95260 518 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 ALPPP05187 535 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 FCGR1AP12314 374 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 SRP14P37108 136 aaKnown RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 C1QBPQ07021 282 aaKnown RBP3.21□□□□□ -1.9
SYNE2-212ENST00000554584 RAB6CQ53S08 254 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 WDR59Q6PJI9 974 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 DHFR2Q86XF0 187 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 OR14L1PQ8NHC6 308 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 AGAP11Q8TF27 550 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 TOMM40LQ969M1 308 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 PAFAH2Q99487 392 aa3.21□□□□□ -1.9
SYNE2-212ENST00000554584 RAB6CQ9H0N0 254 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms