RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 VARSP26640 1264 aaKnown RBP8.77□□□□□ -1.01
SNHG1-215ENST00000540904 GCAP28676 217 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 MAGEA12P43365 314 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 AVPR1BP47901 424 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 OCA2Q04671 838 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 CHAF1BQ13112 559 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 KCNAB2Q13303 367 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 ATP1A4Q13733 1029 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 DSG2Q14126 1118 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 FAM53BQ14153 422 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 SLBPQ14493 270 aaKnown RBP eCLIP8.77□□□□□ -1.01
SNHG1-215ENST00000540904 NKG7Q16617 165 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 PFKFB4Q16877 469 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 CPZQ66K79 652 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 TMEM214Q6NUQ4 689 aaKnown RBP8.77□□□□□ -1.01
SNHG1-215ENST00000540904 SLCO4C1Q6ZQN7 724 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 PRSS41Q7RTY9 318 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 RAB43Q86YS6 212 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 OR9A4Q8NGU2 314 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 RHEBL1Q8TAI7 183 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 ZCCHC10Q8TBK6 192 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 ISL2Q96A47 359 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 TM4SF19Q96DZ7 209 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 MOCOSQ96EN8 888 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 SCYL1Q96KG9 808 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 GPR78Q96P69 363 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 CCDC77Q9BR77 488 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 SARGQ9BW04 601 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 CAPS2Q9BXY5 557 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 CD244Q9BZW8 370 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 SLC26A1Q9H2B4 701 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 EPB41L4BQ9H329 900 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 WDR54Q9H977 334 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 PELI2Q9HAT8 420 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 ZNF358Q9NW07 568 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 GPRC5BQ9NZH0 403 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 CPSF2Q9P2I0 782 aaKnown RBP8.77□□□□□ -1.01
SNHG1-215ENST00000540904 ZNF282Q9UDV7 671 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-215ENST00000540904 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.77□□□□□ -1.01
SNHG1-215ENST00000540904 ZFP69BQ9UJL9 534 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 NXT1Q9UKK6 140 aaKnown RBP8.77□□□□□ -1.01
SNHG1-215ENST00000540904 ASB1Q9Y576 335 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 V9GYY5 206 aaPredicted RBP8.77□□□□□ -1.01
SNHG1-215ENST00000540904 ZFYVE26Q68DK2 2539 aa8.77□□□□□ -1.01
SNHG1-215ENST00000540904 CCDC189A1A4V9 331 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 SGK494L7N484 410 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 PEX12O00623 359 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 MAP2K7O14733 419 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 RFPL1O75677 317 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 DNAJB5O75953 348 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 SHBGP04278 402 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 RBP1P09455 135 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 ZGLP1P0C6A0 271 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 SFTPCP11686 197 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 EPORP19235 508 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 AHRP35869 848 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 HNF4AP41235 474 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 SCTRP47872 440 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 ALDH18A1P54886 795 aaKnown RBP8.76□□□□□ -1.01
SNHG1-215ENST00000540904 VSNL1P62760 191 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 MAT1AQ00266 395 aaKnown RBP8.76□□□□□ -1.01
SNHG1-215ENST00000540904 KLC1Q07866 573 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 RGS1Q08116 209 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 PWP1Q13610 501 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 SETDB1Q15047 1291 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 SYT16Q17RD7 645 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 TSNAXIP1Q2TAA8 658 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 VWA2Q5GFL6 755 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 XKR6Q5GH73 641 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 TECRLQ5HYJ1 363 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 ATG9BQ674R7 924 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 ADGRD1Q6QNK2 874 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 LRRC70Q7Z2Q7 622 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 MRGPREQ86SM8 312 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.76□□□□□ -1.011e-8■■■□□ 17.9
SNHG1-215ENST00000540904 KRT78Q8N1N4 520 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 AMER3Q8N944 861 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 ANKRD53Q8N9V6 530 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 TRPV3Q8NET8 790 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 STT3BQ8TCJ2 826 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 UBTD2Q8WUN7 234 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.76□□□□□ -1.016e-13■■□□□ 14.1
SNHG1-215ENST00000540904 MIEF2Q96C03 454 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 MTBPQ96DY7 904 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 ABHD17AQ96GS6 310 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 SPSB2Q99619 263 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 CRB3Q9BUF7 120 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 TRIM55Q9BYV6 548 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 ING2Q9H160 280 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 ADNPQ9H2P0 1102 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 ANKHQ9HCJ1 492 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 PRM3Q9NNZ6 103 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 ACSS2Q9NR19 701 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 GEMIN8Q9NWZ8 242 aaKnown RBP8.76□□□□□ -1.01
SNHG1-215ENST00000540904 HCN3Q9P1Z3 774 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 PSMC3IPQ9P2W1 217 aaPredicted RBP8.76□□□□□ -1.01
SNHG1-215ENST00000540904 OPTCQ9UBM4 332 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 FETUBQ9UGM5 382 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 TBK1Q9UHD2 729 aa8.76□□□□□ -1.01
SNHG1-215ENST00000540904 NAALAD2Q9Y3Q0 740 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms