RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 TTLQ8NG68 377 aa12.73□□□□□ -0.37
CCDC130-202ENST00000540216 C9orf43Q8TAL5 461 aaPredicted RBP12.73□□□□□ -0.37
CCDC130-202ENST00000540216 STT3BQ8TCJ2 826 aa12.73□□□□□ -0.37
CCDC130-202ENST00000540216 EXT2Q93063 718 aa12.73□□□□□ -0.37
CCDC130-202ENST00000540216 MIEF2Q96C03 454 aa12.73□□□□□ -0.37
CCDC130-202ENST00000540216 MMABQ96EY8 250 aaPredicted RBP12.73□□□□□ -0.37
CCDC130-202ENST00000540216 SEC16BQ96JE7 1060 aa12.73□□□□□ -0.37
CCDC130-202ENST00000540216 FER1L6-AS2Q96M78 137 aa12.73□□□□□ -0.37
CCDC130-202ENST00000540216 SEMA4CQ9C0C4 833 aa12.73□□□□□ -0.37
CCDC130-202ENST00000540216 ING2Q9H160 280 aa12.73□□□□□ -0.37
CCDC130-202ENST00000540216 SLC25A18Q9H1K4 315 aa12.73□□□□□ -0.37
CCDC130-202ENST00000540216 ACSS2Q9NR19 701 aa12.73□□□□□ -0.37
CCDC130-202ENST00000540216 SEMA3GQ9NS98 782 aa12.73□□□□□ -0.37
CCDC130-202ENST00000540216 TRPC4Q9UBN4 977 aa12.73□□□□□ -0.37
CCDC130-202ENST00000540216 ZFP69BQ9UJL9 534 aa12.73□□□□□ -0.37
CCDC130-202ENST00000540216 SLC22A7Q9Y694 548 aa12.73□□□□□ -0.37
CCDC130-202ENST00000540216 A0A0A6YYC8 382 aaPredicted RBP12.72□□□□□ -0.37
CCDC130-202ENST00000540216 URADA6NGE7 173 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 SUPT3HB4E1H0 165 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 I3L1I5 382 aaPredicted RBP12.72□□□□□ -0.37
CCDC130-202ENST00000540216 PCDH17O14917 1159 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 CLGNO14967 610 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 NDUFS4O43181 175 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 KALRNO60229 2985 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 H2AFYO75367 372 aaKnown RBP12.72□□□□□ -0.37
CCDC130-202ENST00000540216 SUPT3HO75486 399 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 C1QL1O75973 258 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 PRB1P04280 392 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 CYC1P08574 325 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 ZGLP1P0C6A0 271 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 FAM153BP0C7A2 387 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 ATXN8OSP0DMR3 200 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 C1GALT1C1LP0DN25 315 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 KCNC1P48547 511 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 HSPA7P48741 367 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 IRF9Q00978 393 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 ATP1A4Q13733 1029 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 COL9A2Q14055 689 aaPredicted RBP12.72□□□□□ -0.37
CCDC130-202ENST00000540216 HERC3Q15034 1050 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 TSNAXIP1Q2TAA8 658 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 C18orf21Q32NC0 220 aaPredicted RBP12.72□□□□□ -0.37
CCDC130-202ENST00000540216 FAM153CQ494X1 144 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 PPP1R32Q7Z5V6 425 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 KRT78Q8N1N4 520 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 ZNF843Q8N446 348 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 DTWD1Q8N5C7 304 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 ZNF740Q8NDX6 193 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 TRPV3Q8NET8 790 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 UHMK1Q8TAS1 419 aaKnown RBP12.72□□□□□ -0.37
CCDC130-202ENST00000540216 NT5CQ8TCD5 201 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 MTBPQ96DY7 904 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 CD244Q9BZW8 370 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 TGIF2Q9GZN2 237 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 VPS11Q9H270 941 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 SPNS1Q9H2V7 528 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 ANKHQ9HCJ1 492 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 COPG2Q9UBF2 871 aa12.72□□□□□ -0.37
CCDC130-202ENST00000540216 G3BP2Q9UN86 482 aaKnown RBP12.72□□□□□ -0.37
CCDC130-202ENST00000540216 MRPS2Q9Y399 296 aaKnown RBP12.72□□□□□ -0.37
CCDC130-202ENST00000540216 ARGFXA6NJG6 315 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 TRIM49D1C9J1S8 452 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 AGPSO00116 658 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 UBXN8O00124 270 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 SNRPAP09012 282 aaKnown RBP12.71□□□□□ -0.37
CCDC130-202ENST00000540216 RBP1P09455 135 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 MTHFD2P13995 350 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 GMPRP36959 345 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 ALDH18A1P54886 795 aaKnown RBP12.71□□□□□ -0.37
CCDC130-202ENST00000540216 KLC1Q07866 573 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 SLBPQ14493 270 aaKnown RBP eCLIP12.71□□□□□ -0.37
CCDC130-202ENST00000540216 DCAF10Q5QP82 559 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 CPZQ66K79 652 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 TCTN3Q6NUS6 607 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 METTL2BQ6P1Q9 378 aaKnown RBP12.71□□□□□ -0.37
CCDC130-202ENST00000540216 ADGRD1Q6QNK2 874 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 TMIGD1Q6UXZ0 262 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 ABHD13Q7L211 337 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 SNX31Q8N9S9 440 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 KCT2Q8NC54 265 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 OR9A4Q8NGU2 314 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 WDR34Q96EX3 536 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 PTCD3Q96EY7 689 aaKnown RBP12.71□□□□□ -0.37
CCDC130-202ENST00000540216 ABHD17AQ96GS6 310 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 GPR78Q96P69 363 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 CCDC77Q9BR77 488 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 CRB3Q9BUF7 120 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 EFCAB11Q9BUY7 163 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 TRIM55Q9BYV6 548 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 SOX17Q9H6I2 414 aaPredicted RBP12.71□□□□□ -0.37
CCDC130-202ENST00000540216 NT5DC2Q9H857 520 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 PPCSQ9HAB8 311 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 P4HTMQ9NXG6 502 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 OPTCQ9UBM4 332 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 TMCO1Q9UM00 188 aa12.71□□□□□ -0.37
CCDC130-202ENST00000540216 PCDHGA9Q9Y5G4 932 aaKnown RBP12.71□□□□□ -0.37
CCDC130-202ENST00000540216 CFAP46Q8IYW2 2715 aa12.7□□□□□ -0.38
CCDC130-202ENST00000540216 ESPNB1AK53 854 aa12.7□□□□□ -0.38
CCDC130-202ENST00000540216 K7EPI3 171 aa12.7□□□□□ -0.38
CCDC130-202ENST00000540216 MAP2K7O14733 419 aa12.7□□□□□ -0.38
CCDC130-202ENST00000540216 KLK8O60259 260 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms