RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 M0QX08 132 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 M0QZQ0 153 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 CLDN5O00501 218 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 CASC3O15234 703 aaKnown RBP11.48□□□□□ -0.57
LINC01089-204ENST00000535643 FFAR2O15552 330 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 SNX2O60749 519 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 UGT2B11O75310 529 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 SLC22A3O75751 556 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 SNAP29O95721 258 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 EPOP01588 193 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 FGF1P05230 155 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 SLC2A3P11169 496 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 ZNF182P17025 639 aaPredicted RBP11.48□□□□□ -0.57
LINC01089-204ENST00000535643 ZNF37AP17032 561 aaPredicted RBP11.48□□□□□ -0.57
LINC01089-204ENST00000535643 HLA-DPA1P20036 260 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 MATN1P21941 496 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 S100A1P23297 94 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 EEF1B2P24534 225 aaKnown RBP11.48□□□□□ -0.57
LINC01089-204ENST00000535643 RYKP34925 604 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 POLR2JP52435 117 aaKnown RBP11.48□□□□□ -0.57
LINC01089-204ENST00000535643 MVKQ03426 396 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 PRKG2Q13237 762 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 TYSND1Q2T9J0 566 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 PLA2G4EQ3MJ16 856 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 ZRANB3Q5FWF4 1079 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 PITRM1Q5JRX3 1037 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 C6orf141Q5SZD1 244 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 C1QTNF12Q5T7M4 302 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 WSCD1Q658N2 575 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 TUBA3EQ6PEY2 450 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 CCDC80Q76M96 950 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 OFCC1Q8IZS5 231 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 ZNF295-AS1Q8N0V1 137 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 SPARTQ8N0X7 666 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 UMODL1-AS1Q8N2C9 162 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 SPATA6LQ8N4H0 392 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 SETD9Q8NE22 299 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 ZMIZ2Q8NF64 920 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 OR13J1Q8NGT2 312 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 FAM174AQ8TBP5 190 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 PHF10Q8WUB8 498 aaKnown RBP11.48□□□□□ -0.57
LINC01089-204ENST00000535643 FBLIM1Q8WUP2 373 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 ANKRD49Q8WVL7 239 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 VPS33AQ96AX1 596 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 TAMM41Q96BW9 452 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 TBC1D20Q96BZ9 403 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 CELF6Q96J87 481 aaKnown RBP11.48□□□□□ -0.57
LINC01089-204ENST00000535643 C1orf74Q96LT6 269 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 HS3ST6Q96QI5 342 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 ALPK1Q96QP1 1244 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 MFRPQ9BY79 579 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 KRTAP3-3Q9BYR6 98 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 KRTAP3-2Q9BYR7 98 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 SLC29A3Q9BZD2 475 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 TRNAU1APQ9NX07 287 aaKnown RBP11.48□□□□□ -0.57
LINC01089-204ENST00000535643 FOXJ2Q9P0K8 574 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 SFMBT1Q9UHJ3 866 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 PDE10AQ9Y233 779 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 ST14Q9Y5Y6 855 aa11.48□□□□□ -0.57
LINC01089-204ENST00000535643 ABCA4P78363 2273 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 POLEQ07864 2286 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 PRAMEF33A0A0G2JMD5 474 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 TLR4O00206 839 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 UPK1AO00322 258 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 HOXC11O43248 304 aaPredicted RBP11.47□□□□□ -0.57
LINC01089-204ENST00000535643 AQP9O43315 295 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 TPST1O60507 370 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 PRAMEF10O60809 474 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 PMPCBO75439 489 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 CRCPO75575 148 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 SCELO95171 688 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 GIMD1P0DJR0 217 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 ITGAMP11215 1152 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 MTHFD2P13995 350 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 BPIP17213 487 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 GGT1P19440 569 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 MSH3P20585 1137 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 HRH2P25021 359 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 PSMA3P25788 255 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 CCR1P32246 355 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 RPL9P32969 192 aaKnown RBP11.47□□□□□ -0.57
LINC01089-204ENST00000535643 ZFP36L2P47974 494 aaKnown RBP11.47□□□□□ -0.57
LINC01089-204ENST00000535643 GPR15P49685 360 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 PLA2G16P53816 162 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 CDKN2DP55273 166 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 CXCR4P61073 352 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 CLCQ05315 142 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 CDC20Q12834 499 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 ATP1A4Q13733 1029 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 GRB7Q14451 532 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 MAPRE1Q15691 268 aaKnown RBP11.47□□□□□ -0.57
LINC01089-204ENST00000535643 INPP5JQ15735 1006 aaPredicted RBP11.47□□□□□ -0.57
LINC01089-204ENST00000535643 DGUOKQ16854 277 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 GEN1Q17RS7 908 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 SLC39A12Q504Y0 691 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 CRTC3Q6UUV7 619 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 CRTC1Q6UUV9 634 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 RAB11FIP2Q7L804 512 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 ZDHHC13Q8IUH4 622 aa11.47□□□□□ -0.57
LINC01089-204ENST00000535643 CARNMT1Q8N4J0 409 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms