RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	ST3GAL3	Q11203	375 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PDPR	Q8NCN5	879 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	OR5K1	Q8NHB7	308 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PSMA8	Q8TAA3	256 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	EZH1	Q92800	747 aa	Predicted RBP	15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TSACC	Q96A04	125 aa	Predicted RBP	15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	RBP7	Q96R05	134 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CHID1	Q9BWS9	393 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MCOLN1	Q9GZU1	580 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ZNF446	Q9NWS9	450 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	H1F0	P07305	194 aa	Known RBP	15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ACRV1	P26436	265 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ZNF763	Q0D2J5	394 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	LPAL2	Q16609	132 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	FAM131A	Q6UXB0	335 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CROCCP3	Q8IVE0	287 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CBR4	Q8N4T8	237 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ZNF630	Q2M218	657 aa	Predicted RBP	15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	OR5L2	Q8NGL0	311 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	C11orf24	Q96F05	449 aa	Predicted RBP	15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CGREF1	Q99674	301 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CMKLR1	Q99788	373 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	RNF11	Q9Y3C5	154 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	WDR45	Q9Y484	360 aa		15.24	■□□□□ 0.03
NCAPD3-213	ENST00000534532	FARS2	O95363	451 aa	Known RBP	15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	C1GALT1C1L	P0DN25	315 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MATN1	P21941	496 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	GBX2	P52951	348 aa	Predicted RBP	15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MTTP	P55157	894 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	DEFB103A	P81534	67 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	QSOX2	Q6ZRP7	698 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	NR4A3	Q92570	626 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	LGR4	Q9BXB1	951 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ZFR2	Q9UPR6	939 aa	Known RBP	15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	RPL36	Q9Y3U8	105 aa	Known RBP	15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CACNA1F	O60840	1977 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TRBC2	A0A5B9	178 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	NADK	O95544	446 aa	Predicted RBP	15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PTPRCAP	Q14761	206 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	LIPJ	Q5W064	366 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	LNX2	Q8N448	690 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ZNF676	Q8N7Q3	588 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	OR10G2	Q8NGC3	310 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	C14orf105	Q9NVL8	296 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PDE4DIP	Q5VU43	2346 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ADRB3	P13945	408 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	BMP8B	P34820	402 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	NUDT1	P36639	197 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TSPAN5	P62079	268 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	POU6F2	P78424	691 aa	Predicted RBP	15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ID2	Q02363	134 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PLP2	Q04941	152 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	RIN1	Q13671	783 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	HERC3	Q15034	1050 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	BMP8A	Q7Z5Y6	402 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	NPAS3	Q8IXF0	933 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CSNK1A1L	Q8N752	337 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PRSS51	A0A1B0GVH4	220 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ZNF860	A6NHJ4	632 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CXorf49	A8MYA2	514 aa	Predicted RBP	15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	RPS15A	P62244	130 aa	Known RBP	15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PRPF38B	Q5VTL8	546 aa	Known RBP	15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	FIP1L1	Q6UN15	594 aa	Known RBP	15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	SATL1	Q86VE3	508 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MCFD2	Q8NI22	146 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TOP1MT	Q969P6	601 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	G6PC3	Q9BUM1	346 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TIGAR	Q9NQ88	270 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	POLE3	Q9NRF9	147 aa		15.23	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ITGA3	P26006	1051 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	KCNC1	P48547	511 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	HHEX	Q03014	270 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	LPCAT4	Q643R3	524 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ZDHHC1	Q8WTX9	485 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TLCD1	Q96CP7	247 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	KCNC2	Q96PR1	638 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	GFM1	Q96RP9	751 aa	Known RBP	15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	TRIB3	Q96RU7	358 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	FZD3	Q9NPG1	666 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	IFT46	Q9NQC8	304 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	RSL24D1	Q9UHA3	163 aa	Known RBP	15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	ZNF142	P52746	1687 aa	Predicted RBP	15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	PLOD3	O60568	738 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	NELFE	P18615	380 aa	Known RBP	15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	XK	P51811	444 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	VBP1	P61758	197 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	DSC1	Q08554	894 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	DCTN2	Q13561	401 aa	Known RBP	15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	GRM7	Q14831	915 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	LASP1	Q14847	261 aa	Known RBP	15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	APCDD1	Q8J025	514 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	GHDC	Q8N2G8	530 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MEIOB	Q8N635	442 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	RPLP0P6	Q8NHW5	317 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	DDX1	Q92499	740 aa	Known RBP	15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	GPN1	Q9HCN4	374 aa	Predicted RBP	15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	CAPN8	A6NHC0	703 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	FAM72C	H0Y354	149 aa		15.22	■□□□□ 0.03
NCAPD3-213	ENST00000534532	MAP3K8	P41279	467 aa		15.22	■□□□□ 0.03

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms