RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 GP9P14770 177 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 ANPEPP15144 967 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 CHRNB2P17787 502 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 CBLP22681 906 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 CCR1P32246 355 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 PIGAP37287 484 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 ALDH3B1P43353 468 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 CD151P48509 253 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 ETV1P50549 477 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 TNFSF10P50591 281 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 CCL11P51671 97 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 CLCN4P51793 760 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 SUCLG1P53597 346 aaKnown RBP4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 NAPAP54920 295 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 AIF1P55008 147 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 MAZP56270 477 aaKnown RBP4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 GABPAQ06546 454 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 DMTNQ08495 405 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 KRT31Q15323 416 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 SSX2Q16385 188 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 CA9Q16790 459 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 UGT3A2Q3SY77 523 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 ARMCX4Q5H9R4 360 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 MIIPQ5JXC2 388 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 C20orf194Q5TEA3 1177 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 PRAMEF20Q5VT98 475 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 HIST2H2AA3Q6FI13 130 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 PMF1Q6P1K2 205 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 ZNF367Q7RTV3 350 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 FOXRED2Q8IWF2 684 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 SLC44A3Q8N4M1 653 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 CPSF7Q8N684 471 aaKnown RBP4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 SLC44A5Q8NCS7 719 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 OR4K1Q8NGD4 311 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 AKR7LQ8NHP1 331 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 C11orf24Q96F05 449 aaPredicted RBP4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 MAGED4Q96JG8 741 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 FAM71F1Q96KD3 344 aaPredicted RBP4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 WDR77Q9BQA1 342 aaPredicted RBP4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 GPR61Q9BZJ8 451 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 SLC39A8Q9C0K1 460 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 GANQ9H2C0 597 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 PNNQ9H307 717 aaKnown RBP4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 FN3KRPQ9HA64 309 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 CLK4Q9HAZ1 481 aaKnown RBP4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 IL17RBQ9NRM6 502 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 THSD1Q9NS62 852 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 SYBUQ9NX95 663 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 NDUFA13Q9P0J0 144 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 FOXJ2Q9P0K8 574 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 IL36RNQ9UBH0 155 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 COPS7AQ9UBW8 275 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 BCAP29Q9UHQ4 241 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 CNOT11Q9UKZ1 510 aaKnown RBP4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 ZNF490Q9ULM2 529 aaPredicted RBP4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 TESMINQ9Y4I5 508 aa4.05□□□□□ -1.76
AC055878.1-201ENST00000531858 PLEKHG2Q9H7P9 1386 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 PCDH11YQ9BZA8 1340 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 A0A075B6Q4 140 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 TMEM89A2RUT3 159 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 BECN2A8MW95 431 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 KCNU1A8MYU2 1149 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 MDM4O15151 490 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 OGTO15294 1046 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 MED7O43513 233 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 SMAD6O43541 496 aaKnown RBP4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 IFNA2P01563 188 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 IL1BP01584 269 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 UGT2B4P06133 528 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 FGF4P08620 206 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 CT45A8P0DMV1 189 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 CT45A9P0DMV2 189 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 ANXA8P13928 327 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 S1PR1P21453 382 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 CAPGP40121 348 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 PEX5P50542 639 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 PPT1P50897 306 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 VAMP7P51809 220 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 HAND2P61296 217 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 RPS13P62277 151 aaKnown RBP4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 FKBP1BP68106 108 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 SIM1P81133 766 aaPredicted RBP4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 CBX1P83916 185 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 NHLH1Q02575 133 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 KRTAP1-1Q07627 177 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 NCBP1Q09161 790 aaKnown RBP4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 FUT7Q11130 342 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 MYBPHQ13203 477 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 NME3Q13232 169 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 MSLNQ13421 630 aaPredicted RBP4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 ZNF169Q14929 603 aaPredicted RBP4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 EFTUD2Q15029 972 aaKnown RBP eCLIP4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 PTPAQ15257 358 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 ZRSR1Q15695 479 aaKnown RBP4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 EFNB3Q15768 340 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 PHKG1Q16816 387 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 EXOC3L2Q2M3D2 409 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 ADPRMQ3LIE5 342 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 DCAF4L1Q3SXM0 396 aa4.04□□□□□ -1.76
AC055878.1-201ENST00000531858 USH1GQ495M9 461 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms