RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 MIPEPQ99797 713 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 ZFYVE21Q9BQ24 234 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 PLCD4Q9BRC7 762 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 SLC7A5P2Q9GIP4 190 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 CCDC68Q9H2F9 335 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 ZNF71Q9NQZ8 489 aaPredicted RBP6.74□□□□□ -1.33
ITGB1-218ENST00000528877 ACSS2Q9NR19 701 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 SLC22A11Q9NSA0 550 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 CUTCQ9NTM9 273 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 TRMT1Q9NXH9 659 aaKnown RBP6.74□□□□□ -1.33
ITGB1-218ENST00000528877 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.74□□□□□ -1.33
ITGB1-218ENST00000528877 IFT80Q9P2H3 777 aaPredicted RBP6.74□□□□□ -1.33
ITGB1-218ENST00000528877 DHCR7Q9UBM7 475 aaKnown RBP6.74□□□□□ -1.33
ITGB1-218ENST00000528877 RNF14Q9UBS8 474 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 NDOR1Q9UHB4 597 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 CIDEBQ9UHD4 219 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 MAD1L1Q9Y6D9 718 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 SPTBP11277 2137 aa6.74□□□□□ -1.33
ITGB1-218ENST00000528877 SPTAN1Q13813 2472 aaKnown RBP6.73□□□□□ -1.33
ITGB1-218ENST00000528877 ARGFXA6NJG6 315 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 E7ESA3 106 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 SLC16A5O15375 505 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 NRP2O60462 931 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 KLHL41O60662 606 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 HAUS5O94927 633 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 SLITRK5O94991 958 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 TSPAN12O95859 305 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 C8GP07360 202 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 CYC1P08574 325 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 PIM1P11309 404 aaPredicted RBP6.73□□□□□ -1.33
ITGB1-218ENST00000528877 MMP11P24347 488 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 HRH2P25021 359 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 GABRB3P28472 473 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 IMPA1P29218 277 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 RPA3P35244 121 aaPredicted RBP6.73□□□□□ -1.33
ITGB1-218ENST00000528877 KIR3DL1P43629 444 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 TERF1P54274 439 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 MPP1Q00013 466 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 PRDX1Q06830 199 aaKnown RBP6.73□□□□□ -1.33
ITGB1-218ENST00000528877 ILF2Q12905 390 aaKnown RBP6.73□□□□□ -1.33
ITGB1-218ENST00000528877 CHAF1BQ13112 559 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 CUL1Q13616 776 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 FASTKQ14296 549 aaKnown RBP6.73□□□□□ -1.33
ITGB1-218ENST00000528877 NKG7Q16617 165 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 FAM214AQ32MH5 1076 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 HSP90AA5PQ58FG0 334 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 DCAF10Q5QP82 559 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 VWA5B1Q5TIE3 1220 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 C1orf189Q5VU69 101 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 FAM69BQ5VUD6 431 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 GARNL3Q5VVW2 1013 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 PRAMEF13Q5VWM6 474 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 ICE2Q659A1 982 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 FRMPD2BQ6IN97 320 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 UGT3A1Q6NUS8 523 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 LETMD1Q6P1Q0 360 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 PRMT9Q6P2P2 845 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 IGFL3Q6UXB1 125 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 CYHR1Q6ZMK1 362 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 TTLL10Q6ZVT0 673 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 OVCH1Q7RTY7 1134 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 PIWIL4Q7Z3Z4 852 aaKnown RBP6.73□□□□□ -1.33
ITGB1-218ENST00000528877 PTRH1Q86Y79 214 aaKnown RBP6.73□□□□□ -1.33
ITGB1-218ENST00000528877 CPNE9Q8IYJ1 553 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 PDIK1LQ8N165 341 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 C2orf73Q8N5S3 287 aaPredicted RBP6.73□□□□□ -1.33
ITGB1-218ENST00000528877 CLEC1AQ8NC01 280 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 GATAD2BQ8WXI9 593 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 ANP32BQ92688 251 aaKnown RBP6.73□□□□□ -1.33
ITGB1-218ENST00000528877 MIB2Q96AX9 1013 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 PTERQ96BW5 349 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 SNF8Q96H20 258 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 FER1L6-AS2Q96M78 137 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 OR2A5Q96R48 311 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 PKP4Q99569 1192 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 DPH7Q9BTV6 452 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 SLC25A23Q9BV35 468 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 TRIM4Q9C037 500 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 MRPS30Q9NP92 439 aaKnown RBP6.73□□□□□ -1.33
ITGB1-218ENST00000528877 UTP6Q9NYH9 597 aaKnown RBP6.73□□□□□ -1.33
ITGB1-218ENST00000528877 GPR83Q9NYM4 423 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 TAS2R13Q9NYV9 303 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 C5AR2Q9P296 337 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 TRMT6Q9UJA5 497 aaKnown RBP6.73□□□□□ -1.33
ITGB1-218ENST00000528877 KLHL20Q9Y2M5 609 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 PTRH2Q9Y3E5 179 aaKnown RBP6.73□□□□□ -1.33
ITGB1-218ENST00000528877 ZNF451Q9Y4E5 1061 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 SAR1BQ9Y6B6 198 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 TEX264Q9Y6I9 313 aa6.73□□□□□ -1.33
ITGB1-218ENST00000528877 DOPEY1Q5JWR5 2465 aa6.72□□□□□ -1.33
ITGB1-218ENST00000528877 HYKKA2RU49 373 aa6.72□□□□□ -1.33
ITGB1-218ENST00000528877 AGPSO00116 658 aa6.72□□□□□ -1.33
ITGB1-218ENST00000528877 TXNDC9O14530 226 aa6.72□□□□□ -1.33
ITGB1-218ENST00000528877 SOCS6O14544 535 aa6.72□□□□□ -1.33
ITGB1-218ENST00000528877 PCDH17O14917 1159 aa6.72□□□□□ -1.33
ITGB1-218ENST00000528877 TTI1O43156 1089 aa6.72□□□□□ -1.33
ITGB1-218ENST00000528877 PRPF4O43172 522 aaKnown RBP eCLIP6.72□□□□□ -1.331e-9■■□□□ 12.7
ITGB1-218ENST00000528877 ZBTB14O43829 449 aa6.72□□□□□ -1.33
ITGB1-218ENST00000528877 DPM1O60762 260 aa6.72□□□□□ -1.33
ITGB1-218ENST00000528877 BANF1O75531 89 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms