RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 LRRC56Q8IYG6 542 aaPredicted RBP14.78□□□□□ -0.04
USH1C-207ENST00000527720 OR2L2Q8NH16 312 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.78□□□□□ -0.04
USH1C-207ENST00000527720 HERVK_113Q902F9 699 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 UBE2E3Q969T4 207 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 RSPRY1Q96DX4 576 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 TRIT1Q9H3H1 467 aaKnown RBP14.78□□□□□ -0.04
USH1C-207ENST00000527720 REEP4Q9H6H4 257 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 VNN3Q9NY84 501 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 DEC1Q9P2X7 70 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 PRKAG2Q9UGJ0 569 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 CIDEBQ9UHD4 219 aa14.78□□□□□ -0.04
USH1C-207ENST00000527720 MKI67P46013 3256 aaKnown RBP14.78□□□□□ -0.04
USH1C-207ENST00000527720 BCKDKO14874 412 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 LZTS3O60299 673 aaPredicted RBP14.77□□□□□ -0.04
USH1C-207ENST00000527720 IL7RP16871 459 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 PCGF2P35227 344 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 ITGA1P56199 1179 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 PHEXP78562 749 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 HPCAP84074 193 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 PPP1R8Q12972 351 aaKnown RBP14.77□□□□□ -0.04
USH1C-207ENST00000527720 KEAP1Q14145 624 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 RGNQ15493 299 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 SF1Q15637 639 aaKnown RBP14.77□□□□□ -0.04
USH1C-207ENST00000527720 MEP1AQ16819 746 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 CTU2Q2VPK5 515 aaKnown RBP14.77□□□□□ -0.04
USH1C-207ENST00000527720 KDM4DQ6B0I6 523 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 ADNP2Q6IQ32 1131 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 ANKRD26P1Q6NSI1 321 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 XKR5Q6UX68 686 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 RBM23Q86U06 439 aaKnown RBP14.77□□□□□ -0.04
USH1C-207ENST00000527720 HORMAD1Q86X24 394 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 SLC5A11Q8WWX8 675 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 HSH2DQ96JZ2 352 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 FANCEQ9HB96 536 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 DMRT3Q9NQL9 472 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 DYRK4Q9NR20 520 aa14.77□□□□□ -0.04
USH1C-207ENST00000527720 LAMA2P24043 3122 aaKnown RBP14.77□□□□□ -0.05
USH1C-207ENST00000527720 A0A1B0GVG6 124 aa14.77□□□□□ -0.05
USH1C-207ENST00000527720 PIPSLA2A3N6 862 aa14.77□□□□□ -0.05
USH1C-207ENST00000527720 K7ESM1 405 aa14.77□□□□□ -0.05
USH1C-207ENST00000527720 ACADLP28330 430 aa14.77□□□□□ -0.05
USH1C-207ENST00000527720 PIK3CBP42338 1070 aa14.77□□□□□ -0.05
USH1C-207ENST00000527720 METAP1P53582 386 aa14.77□□□□□ -0.05
USH1C-207ENST00000527720 TAP2Q03519 686 aa14.77□□□□□ -0.05
USH1C-207ENST00000527720 SLBPQ14493 270 aaKnown RBP eCLIP14.77□□□□□ -0.05
USH1C-207ENST00000527720 CATSPEREQ5SY80 951 aa14.77□□□□□ -0.05
USH1C-207ENST00000527720 ANKRD34AQ69YU3 496 aa14.77□□□□□ -0.05
USH1C-207ENST00000527720 NXPE4Q6UWF7 544 aa14.77□□□□□ -0.05
USH1C-207ENST00000527720 ERN2Q76MJ5 926 aaKnown RBP14.77□□□□□ -0.05
USH1C-207ENST00000527720 TRMT11Q7Z4G4 463 aaKnown RBP14.77□□□□□ -0.05
USH1C-207ENST00000527720 TRIM74Q86UV6 250 aa14.77□□□□□ -0.05
USH1C-207ENST00000527720 SPARTQ8N0X7 666 aa14.77□□□□□ -0.05
USH1C-207ENST00000527720 GPR156Q8NFN8 814 aa14.77□□□□□ -0.05
USH1C-207ENST00000527720 OR10Q1Q8NGQ4 319 aa14.77□□□□□ -0.05
USH1C-207ENST00000527720 SMG7Q92540 1137 aaKnown RBP14.77□□□□□ -0.05
USH1C-207ENST00000527720 CCDC177Q9NQR7 707 aaPredicted RBP14.77□□□□□ -0.05
USH1C-207ENST00000527720 ADPRHL2Q9NX46 363 aa14.77□□□□□ -0.05
USH1C-207ENST00000527720 NAALAD2Q9Y3Q0 740 aa14.77□□□□□ -0.05
USH1C-207ENST00000527720 M0QX08 132 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 SLC1A7O00341 560 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 PI15O43692 258 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 ATE1O95260 518 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 FKBP9O95302 570 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 C1QCP02747 245 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 HLA-EP13747 358 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 VIPR2P41587 438 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 VLDLRP98155 873 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 STARD3Q14849 445 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 GAB4Q2WGN9 574 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 ZNF547Q8IVP9 402 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 OR4A15Q8NGL6 344 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 MTERF3Q96E29 417 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 FAM129BQ96TA1 746 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 TMEM245Q9H330 911 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 PRM3Q9NNZ6 103 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 MYNNQ9NPC7 610 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 SH3BP4Q9P0V3 963 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 MMP20O60882 483 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 JRKO75564 520 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 POP7O75817 140 aaKnown RBP14.76□□□□□ -0.05
USH1C-207ENST00000527720 ZNF8P17098 575 aaPredicted RBP14.76□□□□□ -0.05
USH1C-207ENST00000527720 SLC6A11P48066 632 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 RPA4Q13156 261 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 PDE7AQ13946 482 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 ELOAQ14241 798 aaKnown RBP14.76□□□□□ -0.05
USH1C-207ENST00000527720 CEP68Q76N32 757 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 COMMD6Q7Z4G1 85 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 ARHGAP22Q7Z5H3 698 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 DSG4Q86SJ6 1040 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 CYP4Z1Q86W10 505 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 C11orf65Q8NCR3 313 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 RAB2BQ8WUD1 216 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 RAB7BQ96AH8 199 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 DPH2Q9BQC3 489 aaPredicted RBP14.76□□□□□ -0.05
USH1C-207ENST00000527720 REEP1Q9H902 201 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 FAF1Q9UNN5 650 aaPredicted RBP14.76□□□□□ -0.05
USH1C-207ENST00000527720 EXO1Q9UQ84 846 aaKnown RBP14.76□□□□□ -0.05
USH1C-207ENST00000527720 SNX5Q9Y5X3 404 aa14.76□□□□□ -0.05
USH1C-207ENST00000527720 ALPK3Q96L96 1907 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms