RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 TBC1D13Q9NVG8 400 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 DNAJC17Q9NVM6 304 aaKnown RBP3.47□□□□□ -1.85
SKP1-212ENST00000523966 C2orf42Q9NWW7 574 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 PPP2R2CQ9Y2T4 447 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 NSG2Q9Y328 171 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 TOPBP1Q92547 1522 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 GOLGA3Q08378 1498 aa3.47□□□□□ -1.85
SKP1-212ENST00000523966 ACEP12821 1306 aa3.46□□□□□ -1.85
SKP1-212ENST00000523966 A8MVM7 634 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 C2CD4DB7Z1M9 353 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 SOCS5O75159 536 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 SEC24AO95486 1093 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 VTNP04004 478 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 EEF2P13639 858 aaKnown RBP3.46□□□□□ -1.86
SKP1-212ENST00000523966 GNB3P16520 340 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 CEBPBP17676 345 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 CTNNB1P35222 781 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 FRKP42685 505 aaPredicted RBP3.46□□□□□ -1.86
SKP1-212ENST00000523966 TSFMP43897 325 aaKnown RBP3.46□□□□□ -1.86
SKP1-212ENST00000523966 IER3P46695 156 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 PAX9P55771 341 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 CLDN17P56750 224 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 DCDC1P59894 354 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 ASIC1P78348 528 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 TEFQ10587 303 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 PPA1Q15181 289 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 OTUD3Q5T2D3 398 aaPredicted RBP3.46□□□□□ -1.86
SKP1-212ENST00000523966 SUSD4Q5VX71 490 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 ANKRD33Q7Z3H0 272 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 PTAR1Q7Z6K3 402 aaPredicted RBP3.46□□□□□ -1.86
SKP1-212ENST00000523966 KLHDC8BQ8IXV7 354 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 TCEANCQ8N8B7 351 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 LRTM2Q8N967 370 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 OR5T2Q8NGG2 359 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 OR4D10Q8NGI6 311 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 FIBINQ8TAL6 211 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 APOBEC4Q8WW27 367 aaKnown RBP3.46□□□□□ -1.86
SKP1-212ENST00000523966 PRAC1Q96KF2 57 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 ATG101Q9BSB4 218 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 ALKBH7Q9BT30 221 aaPredicted RBP3.46□□□□□ -1.86
SKP1-212ENST00000523966 CLEC7AQ9BXN2 247 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 DGCR6LQ9BY27 220 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 THAP2Q9H0W7 228 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 RSPH9Q9H1X1 276 aaPredicted RBP3.46□□□□□ -1.86
SKP1-212ENST00000523966 CUEDC2Q9H467 287 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 DPEP2Q9H4A9 486 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 RAVER2Q9HCJ3 691 aaKnown RBP3.46□□□□□ -1.86
SKP1-212ENST00000523966 RAB9BQ9NP90 201 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 PHPT1Q9NRX4 125 aaPredicted RBP3.46□□□□□ -1.86
SKP1-212ENST00000523966 MAN2C1Q9NTJ4 1040 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 ATAD3AQ9NVI7 634 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 HACD3Q9P035 362 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 TRPC4Q9UBN4 977 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 GAB2Q9UQC2 676 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 CUX2O14529 1486 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 FGD5Q6ZNL6 1462 aa3.46□□□□□ -1.86
SKP1-212ENST00000523966 A0A087WUV0 522 aaPredicted RBP3.45□□□□□ -1.86
SKP1-212ENST00000523966 A0A0B4J203 849 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 TRBV4-1A0A0J9YWV2 114 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 C2orf92A0A1B0GVN3 265 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 MSGN1A6NI15 193 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 CCL24O00175 119 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 SLC1A7O00341 560 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 PGRMC2O15173 223 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 SCO2O43819 266 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 MAGEC1O60732 1142 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 GRAP2O75791 330 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 NXPH2O95156 264 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 BAG3O95817 575 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 IGLV1-44P01699 117 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 TMEM132DQ14C87 1099 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 EXT1Q16394 746 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 ZNF674Q2M3X9 581 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 HLA-BQ31612 363 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 TMEM30BQ3MIR4 351 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 CCDC184Q52MB2 194 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 ARMCX4Q5H9R4 360 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 PWWP2BQ6NUJ5 590 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 SLC25A47Q6Q0C1 308 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 FIP1L1Q6UN15 594 aaKnown RBP3.45□□□□□ -1.86
SKP1-212ENST00000523966 IL17RELQ6ZVW7 336 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 CCDC83Q8IWF9 413 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 SMAP2Q8WU79 429 aaPredicted RBP3.45□□□□□ -1.86
SKP1-212ENST00000523966 ZNRF4Q8WWF5 429 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 RBM41Q96IZ5 413 aaKnown RBP3.45□□□□□ -1.86
SKP1-212ENST00000523966 IL12RB2Q99665 862 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 SYT15Q9BQS2 421 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 FGF22Q9HCT0 170 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 IARS2Q9NSE4 1012 aaKnown RBP3.45□□□□□ -1.86
SKP1-212ENST00000523966 PANK4Q9NVE7 773 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 POLKQ9UBT6 870 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 NOCTQ9UK39 431 aaKnown RBP3.45□□□□□ -1.86
SKP1-212ENST00000523966 PPP1R3CQ9UQK1 317 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 PCDHGA1Q9Y5H4 931 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 CARMIL1Q5VZK9 1371 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 HEG1Q9ULI3 1381 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 POLA1P09884 1462 aaPredicted RBP3.45□□□□□ -1.86
SKP1-212ENST00000523966 ERCC6Q03468 1493 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 PRXQ9BXM0 1461 aa3.45□□□□□ -1.86
SKP1-212ENST00000523966 MRC2Q9UBG0 1479 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms