RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 CEP112Q8N8E3 955 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 NIPA2Q8N8Q9 360 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 STKLD1Q8NE28 680 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 BBS10Q8TAM1 723 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 SPPL2BQ8TCT7 592 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 GDPD5Q8WTR4 605 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 C2orf15Q8WU43 125 aaKnown RBP3.86□□□□□ -1.79
CLK4-207ENST00000520909 UBE2Q2Q8WVN8 375 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 IRGQQ8WZA9 623 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 KRT35Q92764 455 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 GOLGA1Q92805 767 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 CFAP57Q96MR6 1250 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 ZWILCHQ9H900 591 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 FKRPQ9H9S5 495 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 CNGB3Q9NQW8 809 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 TLR8Q9NR97 1041 aaKnown RBP3.86□□□□□ -1.79
CLK4-207ENST00000520909 MRPL17Q9NRX2 175 aaKnown RBP3.86□□□□□ -1.79
CLK4-207ENST00000520909 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.86□□□□□ -1.79
CLK4-207ENST00000520909 COX16Q9P0S2 106 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 STK39Q9UEW8 545 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 PCSK1NQ9UHG2 260 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 MTUS1Q9ULD2 1270 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.86□□□□□ -1.79
CLK4-207ENST00000520909 MYH10P35580 1976 aa3.86□□□□□ -1.79
CLK4-207ENST00000520909 CTAGE15A4D2H0 777 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 YJEFN3A6XGL0 299 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 E7ENQ6 273 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 PI4K2BG5E9Z4 385 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 PGRMC1O00264 195 aaKnown RBP3.85□□□□□ -1.79
CLK4-207ENST00000520909 TEX28O15482 410 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 PSTPIP1O43586 416 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 PRPSAP2O60256 369 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 LRCH4O75427 683 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 CRLF1O75462 422 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 DAB1O75553 588 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 RTN3O95197 1032 aaPredicted RBP3.85□□□□□ -1.79
CLK4-207ENST00000520909 SEC24AO95486 1093 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 TRUB2O95900 331 aaKnown RBP3.85□□□□□ -1.79
CLK4-207ENST00000520909 FGGP02679 453 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 CA3P07451 260 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 KRT7P08729 469 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 CNPP09543 421 aaKnown RBP3.85□□□□□ -1.79
CLK4-207ENST00000520909 CTAGE8P0CG41 777 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 TCF4P15884 667 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 MIPP30301 263 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 RYKP34925 604 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 PCK1P35558 622 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 CETN2P41208 172 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 MATKP42679 507 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 SULT1E1P49888 294 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 TERF1P54274 439 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 YWHAGP61981 247 aaKnown RBP eCLIP3.85□□□□□ -1.79
CLK4-207ENST00000520909 ROR1Q01973 937 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 NME3Q13232 169 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 RUNX2Q13950 521 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 SMC1AQ14683 1233 aaKnown RBP3.85□□□□□ -1.79
CLK4-207ENST00000520909 TAF12Q16514 161 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 LPAL2Q16609 132 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 SLC25A52Q3SY17 297 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 RAB6CQ53S08 254 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 ESCO2Q56NI9 601 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 CCNYL2Q5T2Q4 361 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 SEL1L2Q5TEA6 688 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 LRRC38Q5VT99 294 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 SYPL2Q5VXT5 272 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 PLPP4Q5VZY2 271 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 BSPRYQ5W0U4 402 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 TPGS2Q68CL5 300 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 TXNRD3NBQ6F5E7 133 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 PM20D1Q6GTS8 502 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 TANGO2Q6ICL3 276 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 SCD5Q86SK9 330 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 CTAGE6Q86UF2 777 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 TMEM219Q86XT9 240 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 CCDC50Q8IVM0 306 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 CTAGE4Q8IX94 777 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 GPR65Q8IYL9 337 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 KATNAL2Q8IYT4 538 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 RNF168Q8IYW5 571 aaPredicted RBP3.85□□□□□ -1.79
CLK4-207ENST00000520909 RCOR2Q8IZ40 523 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 NUP93Q8N1F7 819 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 ARHGAP18Q8N392 663 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 ATG16L2Q8NAA4 619 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 KCTD6Q8NC69 237 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 OR6Y1Q8NGX8 325 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 ZNF461Q8TAF7 563 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 SPPL3Q8TCT6 385 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 RNF139Q8WU17 664 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 FAM172AQ8WUF8 416 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 POF1BQ8WVV4 589 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 FBXO32Q969P5 355 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 ZNF524Q96C55 264 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 SPATA17Q96L03 361 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 TGS1Q96RS0 853 aaKnown RBP3.85□□□□□ -1.79
CLK4-207ENST00000520909 NCAPGQ9BPX3 1015 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 TRIM62Q9BVG3 475 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 HEMGNQ9BXL5 484 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 AP1M1Q9BXS5 423 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 RAB6CQ9H0N0 254 aa3.85□□□□□ -1.79
CLK4-207ENST00000520909 ZBP1Q9H171 429 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms