RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 RRP36Q96EU6 259 aaKnown RBP0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 PERPQ96FX8 193 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 RBM18Q96H35 190 aaKnown RBP0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 IMMP1LQ96LU5 166 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 CCDC3Q9BQI4 270 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 PLA2G12AQ9BZM1 189 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 CCSER1Q9C0I3 900 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 EGLN3Q9H6Z9 239 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 IL1RAPQ9NPH3 570 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 DEPPQ9NTK1 212 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 THYN1Q9P016 225 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 IL36AQ9UHA7 158 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 PADI2Q9Y2J8 665 aa0.88□□□□□ -2.27
RNU6-561P-201ENST00000516222 LNP1A1A4G5 178 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 FRMD3A2A2Y4 597 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 NEMP2A6NFY4 417 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 C2CD4DB7Z1M9 353 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 K7EQG2 157 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 LRP3O75074 770 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 CREG1O75629 220 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 DNTTP04053 509 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 ARL3P36405 182 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 MDH2P40926 338 aaKnown RBP0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 P2RY4P51582 365 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 SLC25A1P53007 311 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 BIRC3Q13489 604 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 VEZF1Q14119 521 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 POM121L1PQ3SYA9 428 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 AGAP6Q5VW22 663 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 REP15Q6BDI9 236 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 MFSD12Q6NUT3 480 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 MACC1Q6ZN28 852 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 TMPRSS11BQ86T26 416 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 ANKRD42Q8N9B4 389 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 OR4C15Q8NGM1 316 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 GTSF1Q8WW33 167 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 JAKMIP2Q96AA8 810 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 NABP1Q96AH0 204 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 SAT2Q96F10 170 aaPredicted RBP0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 FAM71F1Q96KD3 344 aaPredicted RBP0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 OLFM1Q99784 485 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 DNAI2Q9GZS0 605 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 OSGEPL1Q9H4B0 414 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 RNF121Q9H920 327 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 ARHGEF38Q9NXL2 777 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 PSD3Q9NYI0 1048 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 RRN3Q9NYV6 651 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 GGA3Q9NZ52 723 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 ARMCX1Q9P291 453 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 SLC12A6Q9UHW9 1150 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 FBXO2Q9UK22 296 aaPredicted RBP0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 SPATA2Q9UM82 520 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 COMMD10Q9Y6G5 202 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 IL16Q14005 1332 aa0.87□□□□□ -2.27
RNU6-561P-201ENST00000516222 ARHGAP23Q9P227 1491 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 A0A087WZ39 114 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 IGLON5A6NGN9 336 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 C17orf51A8MQB3 221 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 CDRT15L2A8MXV6 281 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 LRRTM2O43300 516 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 ECE2O60344 883 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 SNX3O60493 162 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 SEMA4FO95754 770 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 IGKV1-17P01599 117 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 CPN1P15169 458 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 GABRB1P18505 474 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 PPM1FP49593 454 aaPredicted RBP0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 SUOXP51687 545 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 MFAP4P55083 255 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 CXCL9Q07325 125 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 ECSCRQ19T08 205 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 KNOP1Q1ED39 458 aaKnown RBP0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 RNASEH2BQ5TBB1 312 aaKnown RBP0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 SNX30Q5VWJ9 437 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 CHST9Q7L1S5 443 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 NUP54Q7Z3B4 507 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 NAXDQ8IW45 347 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 ZNF540Q8NDQ6 660 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 OR10Q1Q8NGQ4 319 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 GANCQ8TET4 914 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 SCFD2Q8WU76 684 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 ATL1Q8WXF7 558 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 CASP10Q92851 521 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 TSACCQ96A04 125 aaPredicted RBP0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 FAF2Q96CS3 445 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 MCCC1Q96RQ3 725 aaPredicted RBP0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 SERINC2Q96SA4 455 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 PAPOLGQ9BWT3 736 aaKnown RBP0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 KRTAP4-1Q9BYQ7 146 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 AGXT2Q9BYV1 514 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 SLC25A39Q9BZJ4 359 aaPredicted RBP0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 CUEDC2Q9H467 287 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 SMARCAD1Q9H4L7 1026 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 WFDC1Q9HC57 220 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 RAVER2Q9HCJ3 691 aaKnown RBP0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 POLKQ9UBT6 870 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 PILRAQ9UKJ1 303 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 SALL1Q9NSC2 1324 aa0.86□□□□□ -2.27
RNU6-561P-201ENST00000516222 TEX48A0A1B0GUV7 120 aa0.85□□□□□ -2.27
RNU6-561P-201ENST00000516222 A0A1W2PR77 199 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms