RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 IL16Q14005 1332 aa2.31□□□□□ -2.04
NEDD4-211ENST00000514893 OR2A25A4D2G3 310 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 MTMR11A4FU01 709 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 CASTOR2A6NHX0 329 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 ZNF253O75346 499 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 PEX14O75381 377 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 TOMM70O94826 608 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 MDKP21741 143 aaPredicted RBP2.3□□□□□ -2.04
NEDD4-211ENST00000514893 TM4SF1P30408 202 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 FCGR2BP31994 310 aaPredicted RBP2.3□□□□□ -2.04
NEDD4-211ENST00000514893 FCGR2CP31995 323 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 SPRP35270 261 aaPredicted RBP2.3□□□□□ -2.04
NEDD4-211ENST00000514893 GARSP41250 739 aaKnown RBP2.3□□□□□ -2.04
NEDD4-211ENST00000514893 CRYBA2P53672 197 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 ITPK1Q13572 414 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 CUL3Q13618 768 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 GCKRQ14397 625 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 IRF3Q14653 427 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 ISXQ2M1V0 245 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 POM121L1PQ3SYA9 428 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 VWA2Q5GFL6 755 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 TMEM211Q6ICI0 200 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 CYB5D1Q6P9G0 228 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 ZNF600Q6ZNG1 722 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 RYBPQ8N488 228 aaPredicted RBP2.3□□□□□ -2.04
NEDD4-211ENST00000514893 CASP10Q92851 521 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 FAM104AQ969W3 186 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 SIGLEC12Q96PQ1 595 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 PAFAH2Q99487 392 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 SLC26A6Q9BXS9 759 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 SDCBP2Q9H190 292 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 WDR41Q9HAD4 459 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 MYNNQ9NPC7 610 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 EIF2B3Q9NR50 452 aaKnown RBP2.3□□□□□ -2.04
NEDD4-211ENST00000514893 GSN-AS1Q9NRJ2 163 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 SEPT11Q9NVA2 429 aaKnown RBP2.3□□□□□ -2.04
NEDD4-211ENST00000514893 POLLQ9UGP5 575 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 FBXL4Q9UKA2 621 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 NEDD4P46934 1319 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 SALL1Q9NSC2 1324 aa2.3□□□□□ -2.04
NEDD4-211ENST00000514893 GPR75-ASB3A0A0A6YYF3 556 aa2.29□□□□□ -2.04
NEDD4-211ENST00000514893 A0A1W2PPQ1 181 aa2.29□□□□□ -2.04
NEDD4-211ENST00000514893 MAGEB4O15481 346 aaPredicted RBP2.29□□□□□ -2.04
NEDD4-211ENST00000514893 CD1DP15813 335 aa2.29□□□□□ -2.04
NEDD4-211ENST00000514893 TRIM21P19474 475 aaKnown RBP2.29□□□□□ -2.04
NEDD4-211ENST00000514893 IST1P53990 364 aa2.29□□□□□ -2.04
NEDD4-211ENST00000514893 CDH13P55290 713 aa2.29□□□□□ -2.04
NEDD4-211ENST00000514893 G3BP1Q13283 466 aaKnown RBP eCLIP2.29□□□□□ -2.04
NEDD4-211ENST00000514893 GSG1Q2KHT4 349 aa2.29□□□□□ -2.04
NEDD4-211ENST00000514893 ZRANB3Q5FWF4 1079 aa2.29□□□□□ -2.04
NEDD4-211ENST00000514893 C9orf129Q5T035 196 aaKnown RBP2.29□□□□□ -2.04
NEDD4-211ENST00000514893 HAUS3Q68CZ6 603 aa2.29□□□□□ -2.04
NEDD4-211ENST00000514893 CGB2Q6NT52 195 aa2.29□□□□□ -2.04
NEDD4-211ENST00000514893 IL17RELQ6ZVW7 336 aa2.29□□□□□ -2.04
NEDD4-211ENST00000514893 LPGAT1Q92604 370 aa2.29□□□□□ -2.04
NEDD4-211ENST00000514893 TSACCQ96A04 125 aaPredicted RBP2.29□□□□□ -2.04
NEDD4-211ENST00000514893 MAK16Q9BXY0 300 aaKnown RBP2.29□□□□□ -2.04
NEDD4-211ENST00000514893 PLSCR3Q9NRY6 295 aa2.29□□□□□ -2.04
NEDD4-211ENST00000514893 DEPPQ9NTK1 212 aa2.29□□□□□ -2.04
NEDD4-211ENST00000514893 THYN1Q9P016 225 aa2.29□□□□□ -2.04
NEDD4-211ENST00000514893 ARID4BQ4LE39 1312 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-211ENST00000514893 TRAV9-2A0A087WT02 112 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 BCLAF3A2AJT9 711 aaKnown RBP2.28□□□□□ -2.04
NEDD4-211ENST00000514893 CTDSP2O14595 271 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 MAGEB2O15479 319 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 BAG3O95817 575 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 CD4P01730 458 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 IGHG1P01857 330 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 ASNSP08243 561 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 SAGP10523 405 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-211ENST00000514893 PFKFB1P16118 471 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 ACHEP22303 614 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 DNASE1P24855 282 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 BRCC3P46736 316 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 TEFQ10587 303 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 PRKG2Q13237 762 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 KNOP1Q1ED39 458 aaKnown RBP2.28□□□□□ -2.04
NEDD4-211ENST00000514893 RAB41Q5JT25 222 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 MUC21Q5SSG8 566 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 OR4C11Q6IEV9 310 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 MCM10Q7L590 875 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 C5orf24Q7Z6I8 188 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 TTC39CQ8N584 583 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 BANPQ8N9N5 519 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 OR2L5Q8NG80 312 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 OR4C15Q8NGM1 316 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 OR1B1Q8NGR6 318 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 GTSF1Q8WW33 167 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 RUNDC3BQ96NL0 473 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 PAPOLGQ9BWT3 736 aaKnown RBP2.28□□□□□ -2.04
NEDD4-211ENST00000514893 CDH20Q9HBT6 801 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 PKD2L2Q9NZM6 624 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 SUCLA2Q9P2R7 463 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-211ENST00000514893 PGAP2Q9UHJ9 254 aa2.28□□□□□ -2.04
NEDD4-211ENST00000514893 PTGES3LE9PB15 166 aa2.27□□□□□ -2.05
NEDD4-211ENST00000514893 RTCAO00442 366 aaKnown RBP2.27□□□□□ -2.05
NEDD4-211ENST00000514893 RPS6KA5O75582 802 aa2.27□□□□□ -2.05
NEDD4-211ENST00000514893 RAB40ALP0C0E4 278 aa2.27□□□□□ -2.05
NEDD4-211ENST00000514893 NR2C1P13056 603 aa2.27□□□□□ -2.05
NEDD4-211ENST00000514893 RPL9P32969 192 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms