RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ELOVL6Q9H5J4 265 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 DMRT3Q9NQL9 472 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 ZFP69BQ9UJL9 534 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 USH1CQ9Y6N9 552 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 AP1M2Q9Y6Q5 423 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 CEP250Q9BV73 2442 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 PTPRBP23467 1997 aa13.56□□□□□ -0.24
RNF4-208ENST00000507247 DCDC2BA2VCK2 349 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 GMNCA6NCL1 334 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 ANKDD1BA6NHY2 528 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 HDAC3O15379 428 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 SH3BGRLO75368 114 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 ULK1O75385 1050 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 ETHE1O95571 254 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 CHEK2O96017 543 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 LINC00032P0C843 101 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 ALOX15P16050 662 aaPredicted RBP13.55□□□□□ -0.24
RNF4-208ENST00000507247 DRD4P21917 467 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 CCKBRP32239 447 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 PIK3CBP42338 1070 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 ARL4DP49703 201 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 RPS13P62277 151 aaKnown RBP13.55□□□□□ -0.24
RNF4-208ENST00000507247 FOXK2Q01167 660 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 SF3A3Q12874 501 aaKnown RBP eCLIP13.55□□□□□ -0.24
RNF4-208ENST00000507247 HYAL2Q12891 473 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 TRA2AQ13595 282 aaKnown RBP eCLIP13.55□□□□□ -0.24
RNF4-208ENST00000507247 GPR19Q15760 415 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 XKR7Q5GH72 579 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 ZC3H12BQ5HYM0 836 aaKnown RBP13.55□□□□□ -0.24
RNF4-208ENST00000507247 HES3Q5TGS1 186 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 VWA5B1Q5TIE3 1220 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 RNF165Q6ZSG1 346 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 MCATQ8IVS2 390 aaKnown RBP13.55□□□□□ -0.24
RNF4-208ENST00000507247 DDIASQ8IXT1 998 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 CHCHD4Q8N4Q1 142 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 AFAP1L2Q8N4X5 818 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 TBC1D19Q8N5T2 526 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 OR2T11Q8NH01 316 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 RFWD2Q8NHY2 731 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 CCT6BQ92526 530 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 TM4SF19Q96DZ7 209 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 THAP11Q96EK4 314 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 FAR2Q96K12 515 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 TMEM74Q96NL1 305 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 MS4A8Q9BY19 250 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 ACPTQ9BZG2 426 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 RABEP2Q9H5N1 569 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 NPHS2Q9NP85 383 aa13.55□□□□□ -0.24
RNF4-208ENST00000507247 SIDT1Q9NXL6 827 aaKnown RBP13.55□□□□□ -0.24
RNF4-208ENST00000507247 SPTBP11277 2137 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 SERTM1A2A2V5 107 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 FOXE1O00358 373 aaPredicted RBP13.54□□□□□ -0.24
RNF4-208ENST00000507247 SDHDO14521 159 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 NDUFS4O43181 175 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 HYAL3O43820 417 aaPredicted RBP13.54□□□□□ -0.24
RNF4-208ENST00000507247 CLEC3AO75596 197 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 KCNK5O95279 499 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 TGDSO95455 350 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 MT-CO3P00414 261 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 TGFB1P01137 390 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 SERPIND1P05546 499 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 GSTM2P28161 218 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 HK2P52789 917 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 VSX2P58304 361 aaPredicted RBP13.54□□□□□ -0.24
RNF4-208ENST00000507247 SNRPNP63162 240 aaKnown RBP13.54□□□□□ -0.24
RNF4-208ENST00000507247 HMGCS1Q01581 520 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 COL9A2Q14055 689 aaPredicted RBP13.54□□□□□ -0.24
RNF4-208ENST00000507247 ISXQ2M1V0 245 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 TUBB8Q3ZCM7 444 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 Q6ZSR9 355 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 TRIM46Q7Z4K8 759 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 ASPGQ86U10 573 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 TTLQ8NG68 377 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 NT5CQ8TCD5 201 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 C19orf60Q96EN9 201 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 ZNF285Q96NJ3 590 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 FAM107BQ9H098 131 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 EPN3Q9H201 632 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 MEAF6Q9HAF1 191 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 KCNK13Q9HB14 408 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 OCIAD1Q9NX40 245 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 VTI1BQ9UEU0 232 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 ADGRE2Q9UHX3 823 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 PLCL2Q9UPR0 1127 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 APOBEC2Q9Y235 224 aaKnown RBP13.54□□□□□ -0.24
RNF4-208ENST00000507247 CCL27Q9Y4X3 112 aa13.54□□□□□ -0.24
RNF4-208ENST00000507247 SCN3AQ9NY46 2000 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 TMEM150CB9EJG8 249 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 C4orf51C9J302 202 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 SLCO1B7G3V0H7 640 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 H3BMH7 237 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 MAP3K7O43318 606 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 CSO75390 466 aaKnown RBP13.53□□□□□ -0.24
RNF4-208ENST00000507247 EIF2S1P05198 315 aaKnown RBP13.53□□□□□ -0.24
RNF4-208ENST00000507247 MSL3P1P0C860 447 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 CDK4P11802 303 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 HSD3B1P14060 373 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 HSD3B2P26439 372 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 SERPINB1P30740 379 aa13.53□□□□□ -0.24
RNF4-208ENST00000507247 HNRNPH1P31943 449 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms