RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SLC7A7Q9UM01 511 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 PLA2G4CQ9UP65 541 aa3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 RRP15Q9Y3B9 282 aaKnown RBP3.59□□□□□ -1.84
TRAPPC13-208ENST00000505553 ZNF804BA4D1E1 1349 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 LY6G6EA0A0G2JKS1 128 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 A0A0G2JPF8 293 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 A0A1W2PN81 502 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 C5orf60A6NFR6 353 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 HNRNPCL3B7ZW38 293 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 F8WDY8 70 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 GMNNO75496 209 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 SCGB2A1O75556 95 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 IDH1O75874 414 aaKnown RBP3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 PMS2P2O95744 297 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 AK1P00568 194 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 APOHP02749 345 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 SFTPBP07988 381 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 HNRNPCL4P0DMR1 293 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 ITGA2P17301 1181 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 CYP3A5P20815 502 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 CDH3P22223 829 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 PKLRP30613 574 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 STIP1P31948 543 aaKnown RBP3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 CSTF2P33240 577 aaKnown RBP eCLIP3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 CHRNA7P36544 502 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 PGGT1BP53609 377 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 MTTPP55157 894 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 FKBP1BP68106 108 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 RELQ04864 619 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 SPP2Q13103 211 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 DMP1Q13316 513 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 TRIM29Q14134 588 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 GIT2Q14161 759 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 GK2Q14410 553 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 C20orf194Q5TEA3 1177 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 PRAMEF7Q5VXH5 474 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 ZNF626Q68DY1 528 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 SLC25A24Q6NUK1 477 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 IL17RELQ6ZVW7 336 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 MARK2Q7KZI7 788 aaKnown RBP3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 PIWIL4Q7Z3Z4 852 aaKnown RBP3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 CCDC60Q8IWA6 550 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 STHQ8IWL8 128 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 RNF148Q8N7C7 305 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 TMEM99Q8N816 258 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 ZNF114Q8NC26 417 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 OR4A16Q8NH70 328 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 PHLDA1Q8WV24 401 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 THRSPQ92748 146 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 RFT1Q96AA3 541 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 ESAMQ96AP7 390 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 LGALS12Q96DT0 336 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 CARD6Q9BX69 1037 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 FTHL17Q9BXU8 183 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 FGF21Q9NSA1 209 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 FAM212BQ9NTI7 297 aaPredicted RBP3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 TEKT2Q9UIF3 430 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 KCNS2Q9ULS6 477 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 MYO6Q9UM54 1294 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 STUB1Q9UNE7 303 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 ERVK-19Q9WJR5 959 aa3.58□□□□□ -1.84
TRAPPC13-208ENST00000505553 TAF1P21675 1872 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 NCAPD2Q15021 1401 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 A0A087WZY1 265 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 A0A1B0GWJ7 208 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 CLRN2A0PK11 232 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 GPR89AB7ZAQ6 455 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 SLC28A2O43868 658 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 NME2P1O60361 137 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 ACSL4O60488 711 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 CLN5O75503 358 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 PRKRAO75569 313 aaKnown RBP3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 PIGNO95427 931 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 BMP15O95972 392 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 KRT6BP04259 564 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 GPR89BP0CG08 455 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 TPBGLP0DKB5 382 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 PSG1P11464 419 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 GP1BBP13224 206 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 RPS2P15880 293 aaKnown RBP3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 DGKAP23743 735 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 ITGA3P26006 1051 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 CDC25AP30304 524 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 NKX2-1P43699 371 aaPredicted RBP3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 KRT6CP48668 564 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 PCYT1AP49585 367 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 MAZP56270 477 aaKnown RBP3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 BRWD1-AS2P59051 145 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 TAF10Q12962 218 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 TRAF3Q13114 568 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 OPCMLQ14982 345 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 KRT31Q15323 416 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 TAF13Q15543 124 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 STX1AQ16623 288 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 SLC35D3Q5M8T2 416 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 IRAK1BP1Q5VVH5 260 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 RGS9BPQ6ZS82 235 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 TECPR1Q7Z6L1 1165 aa3.57□□□□□ -1.84
TRAPPC13-208ENST00000505553 SFR1Q86XK3 245 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms