RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 ZNF556Q9HAH1 456 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 FOLH1BQ9HBA9 442 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 LYARQ9NX58 379 aaKnown RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 COMMD3Q9UBI1 195 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 LRWD1Q9UFC0 647 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 OAS3Q9Y6K5 1087 aaKnown RBP6.08□□□□□ -1.44
CLCN3-204ENST00000504131 PREX1Q8TCU6 1659 aa6.08□□□□□ -1.44
CLCN3-204ENST00000504131 OR6C68A6NDL8 312 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 MFSD2BA6NFX1 497 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 K7EPK0 472 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 RGS13O14921 159 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 FBXO24O75426 580 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 RPS6KA4O75676 772 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 ALPPP05187 535 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 ALPPL2P10696 532 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 CKMT2P17540 419 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 SOAT1P35610 550 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 GALNT2Q10471 571 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 LARS2Q15031 903 aaKnown RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 OR8G1Q15617 311 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 LTB4RQ15722 352 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 RAB11BQ15907 218 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 MTHFSDQ2M296 383 aaKnown RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 SAMD13Q5VXD3 122 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 TMEM81Q6P7N7 255 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 TBC1D10CQ8IV04 446 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 MISPQ8IVT2 679 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 FAM71E2Q8N5Q1 922 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 OR9K2Q8NGE7 335 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 WDR48Q8TAF3 677 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF420Q8TAQ5 688 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 PHYHIPQ92561 330 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 TXNDC15Q96J42 360 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 REPIN1Q9BWE0 567 aaKnown RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF436Q9C0F3 470 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 CRTAC1Q9NQ79 661 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 SNX15Q9NRS6 342 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 GJB4Q9NTQ9 266 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 NCKIPSDQ9NZQ3 722 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 PLLPQ9Y342 182 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 MAST3O60307 1309 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 CLTCQ00610 1675 aaKnown RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 ZFYVE9O95405 1425 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 FAM205CA6NFA0 338 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 ZNF233A6NK53 670 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 PRR5-ARHGAP8B1AHC4 643 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 KLRF2D3W0D1 207 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 M0R296 226 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 POP7O75817 140 aaKnown RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 SULT1C4O75897 302 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 CRHP06850 196 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 ACPPP15309 386 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 THBS4P35443 961 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 FASLGP48023 281 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 SNTB2Q13425 540 aaKnown RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 GK2Q14410 553 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 HNF4GQ14541 408 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 IRF4Q15306 451 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 PARGQ86W56 976 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 CPNE8Q86YQ8 564 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 CDK20Q8IZL9 346 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 SVBPQ8N300 66 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 TMEM132CQ8N3T6 1108 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 RAB3CQ96E17 227 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 MLXIPQ9HAP2 919 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 DTLQ9NZJ0 730 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 ZNHIT2Q9UHR6 403 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 MRTO4Q9UKD2 239 aaKnown RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 PADI1Q9ULC6 663 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 NEU2Q9Y3R4 380 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 ADAMTSL3P82987 1691 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 WNT7AO00755 349 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 MSI1O43347 362 aaKnown RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 FKTNO75072 461 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 HTR2AP28223 471 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 NR0B1P51843 470 aaKnown RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 FCGRTP55899 365 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 PKIAP61925 76 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 SNRPEP62304 92 aaKnown RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 RASGEF1BQ0VAM2 473 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 SRSF5Q13243 272 aaKnown RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 SLC14A1Q13336 389 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 ASAH1Q13510 395 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 GRAPQ13588 217 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 PEA15Q15121 130 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 ATP6V1FQ16864 119 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 PLEKHN1Q494U1 663 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 TM4SF20Q53R12 229 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 FOXB2Q5VYV0 432 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 ANKRD54Q6NXT1 300 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 REC114Q7Z4M0 266 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 ABHD12BQ7Z5M8 362 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 ADAT2Q7Z6V5 191 aaKnown RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 TMEM200AQ86VY9 491 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 SLC9A9Q8IVB4 645 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 SCN4BQ8IWT1 228 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 BATF2Q8N1L9 274 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 FAM160A2Q8N612 972 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-204ENST00000504131 OR6K3Q8NGY3 331 aa6.07□□□□□ -1.44
CLCN3-204ENST00000504131 FBXO27Q8NI29 283 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms