RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 RXRGP48443 463 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 METAP1P53582 386 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 TMBIM6P55061 237 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 ISL1P61371 349 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 CD47Q08722 323 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 RGNQ15493 299 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 CATSPEREQ5SY80 951 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 DHRS4L2Q6PKH6 230 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 CHPFQ8IZ52 775 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 OR4A15Q8NGL6 344 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 OR2L2Q8NH16 312 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 ZFP90Q8TF47 636 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 SLC5A11Q8WWX8 675 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 UBE2E3Q969T4 207 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 COG8Q96MW5 612 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 DPH2Q9BQC3 489 aaPredicted RBP10.66□□□□□ -0.7
CMSS1-208ENST00000496116 REEP4Q9H6H4 257 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 REEP1Q9H902 201 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 FANCEQ9HB96 536 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 ADPRHL2Q9NX46 363 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 FAF1Q9UNN5 650 aaPredicted RBP10.66□□□□□ -0.7
CMSS1-208ENST00000496116 ERVK-11Q9UQG0 969 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 SNX5Q9Y5X3 404 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 LAMA2P24043 3122 aaKnown RBP10.66□□□□□ -0.7
CMSS1-208ENST00000496116 MYO7AQ13402 2215 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 hCG_2039718K7EN88 272 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 YY2O15391 372 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 PI15O43692 258 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 POP7O75817 140 aaKnown RBP10.66□□□□□ -0.7
CMSS1-208ENST00000496116 CCDC159P0C7I6 412 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 SLC6A11P48066 632 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 CTBSQ01459 385 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 TAP2Q03519 686 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 KEAP1Q14145 624 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 TMEM52BQ4KMG9 183 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 ANKRD34AQ69YU3 496 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 PDE12Q6L8Q7 609 aaKnown RBP10.66□□□□□ -0.7
CMSS1-208ENST00000496116 PIWIL3Q7Z3Z3 882 aaKnown RBP10.66□□□□□ -0.7
CMSS1-208ENST00000496116 DSG4Q86SJ6 1040 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 RBM23Q86U06 439 aaKnown RBP10.66□□□□□ -0.7
CMSS1-208ENST00000496116 CXorf40AQ8TE69 158 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 SETD7Q8WTS6 366 aaKnown RBP10.66□□□□□ -0.7
CMSS1-208ENST00000496116 GAB3Q8WWW8 586 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 DCUN1D5Q9BTE7 237 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 TRIT1Q9H3H1 467 aaKnown RBP10.66□□□□□ -0.7
CMSS1-208ENST00000496116 DMRT3Q9NQL9 472 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 KIF17Q9P2E2 1029 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 ATP6V1HQ9UI12 483 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 HSPE1-MOB4S4R3N1 261 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 KIAA1549LQ6ZVL6 1849 aa10.66□□□□□ -0.7
CMSS1-208ENST00000496116 TCF20Q9UGU0 1960 aaKnown RBP10.65□□□□□ -0.7
CMSS1-208ENST00000496116 C1QTNF3-AMACRE9PGA6 284 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 SLC1A7O00341 560 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 SUV39H1O43463 412 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 DPM1O60762 260 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 DNAJB5O75953 348 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 SEC14L2O76054 403 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 ATE1O95260 518 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 PAPLNO95428 1278 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 ZNF8P17098 575 aaPredicted RBP10.65□□□□□ -0.7
CMSS1-208ENST00000496116 EFNA1P20827 205 aaPredicted RBP10.65□□□□□ -0.7
CMSS1-208ENST00000496116 PCGF2P35227 344 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 POLR2IP36954 125 aaKnown RBP10.65□□□□□ -0.7
CMSS1-208ENST00000496116 PIK3CBP42338 1070 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 ITGA1P56199 1179 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 HPCAP84074 193 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 VLDLRP98155 873 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 IL5RAQ01344 420 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 IL1RL1Q01638 556 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 ZNF234Q14588 700 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 KDM4DQ6B0I6 523 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 XAF1Q6GPH4 301 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 NXPE4Q6UWF7 544 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 ANGPTL8Q6UXH0 198 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 UNC5DQ6UXZ4 953 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 EP400NLQ6ZTU2 488 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 ERN2Q76MJ5 926 aaKnown RBP10.65□□□□□ -0.7
CMSS1-208ENST00000496116 COMMD6Q7Z4G1 85 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 VTCN1Q7Z7D3 282 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 SPARTQ8N0X7 666 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 C11orf65Q8NCR3 313 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 HERVK_113Q902F9 699 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 ZNF566Q969W8 418 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 RAD51AP1Q96B01 352 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 RSPRY1Q96DX4 576 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 THAP11Q96EK4 314 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 TPD52L3Q96J77 140 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 ZFYVE19Q96K21 471 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 CHST8Q9H2A9 424 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 LTB4R2Q9NPC1 389 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 VNN3Q9NY84 501 aa10.65□□□□□ -0.7
CMSS1-208ENST00000496116 PDP1Q9P0J1 537 aaPredicted RBP10.65□□□□□ -0.7
CMSS1-208ENST00000496116 SAMHD1Q9Y3Z3 626 aaKnown RBP10.65□□□□□ -0.7
CMSS1-208ENST00000496116 JRKO75564 520 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 TGFB1P01137 390 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 C1QCP02747 245 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 NTRK1P04629 796 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 CCNA2P20248 432 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 MESP2Q0VG99 397 aa10.64□□□□□ -0.71
CMSS1-208ENST00000496116 NFE2L1Q14494 772 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms