RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 CCDC114Q96M63 670 aa4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 ZNF778Q96MU6 729 aa4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 SEPHS2Q99611 448 aa4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 WNT5BQ9H1J7 359 aa4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 SLA2Q9H6Q3 261 aa4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 MRPL44Q9H9J2 332 aaKnown RBP4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 XAB2Q9HCS7 855 aaKnown RBP4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 MBNL1Q9NR56 388 aaKnown RBP4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 STARD5Q9NSY2 213 aa4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 ABCF3Q9NUQ8 709 aa4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 ARGLU1Q9NWB6 273 aaPredicted RBP4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 HYPKQ9NX55 129 aa4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 MIOSQ9NXC5 875 aa4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 DPP3Q9NY33 737 aa4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 NPAP1Q9NZP6 1156 aa4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 RNF150Q9ULK6 438 aa4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.61□□□□□ -1.671e-11■□□□□ 8.2
SSX2IP-208ENST00000490476 NFS1Q9Y697 457 aa4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 HELZP42694 1942 aaKnown RBP4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 TACC2O95359 2948 aa4.61□□□□□ -1.67
SSX2IP-208ENST00000490476 VWA8A3KMH1 1905 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 BAZ2BQ9UIF8 2168 aaKnown RBP4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 OR5K3A6NET4 321 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 OR6C76A6NM76 312 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 OVOL3O00110 214 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 PSMA7O14818 248 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 SLC7A4O43246 635 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 ATP9AO75110 1047 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 MED24O75448 989 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 GLUD1P00367 558 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 CYP11B2P19099 503 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 HOXA6P31267 233 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 CA8P35219 290 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 GLUD2P49448 558 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 PGGT1BP53609 377 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 UCNP55089 124 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 ZNF155Q12901 538 aaPredicted RBP4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 GAGE2BQ13066 116 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 GCKRQ14397 625 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 SMC1AQ14683 1233 aaKnown RBP4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 NR1D2Q14995 579 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 GAGE2EQ4V326 116 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 SETMARQ53H47 684 aaPredicted RBP4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 MPP7Q5T2T1 576 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 GAGE2AQ6NT46 116 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 C8orf82Q6P1X6 216 aaPredicted RBP4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 C15orf39Q6ZRI6 1047 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 TMPRSS11FQ6ZWK6 438 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 CCDC91Q7Z6B0 441 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 GLRX5Q86SX6 157 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 SIX6OS1Q8N1H7 587 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 FAM216AQ8WUB2 273 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 SLAMF9Q96A28 289 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 SPSB1Q96BD6 273 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 MTERF3Q96E29 417 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 OXNAD1Q96HP4 312 aaPredicted RBP4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 SFXN2Q96NB2 322 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 SLC22A12Q96S37 553 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 RPP25Q9BUL9 199 aaKnown RBP4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 LMAN1LQ9HAT1 526 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 COQ3Q9NZJ6 369 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 DNAJB9Q9UBS3 223 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 GAGE2DQ9UEU5 116 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 SIX4Q9UIU6 781 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 CPSF3Q9UKF6 684 aaKnown RBP4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 PADI2Q9Y2J8 665 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 OR2W1Q9Y3N9 320 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 ZFP37Q9Y6Q3 630 aaPredicted RBP4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 ZMYM6O95789 1325 aa4.6□□□□□ -1.67
SSX2IP-208ENST00000490476 CUBNO60494 3623 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 A0A0G2JPF8 293 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 FAM149AA5PLN7 773 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 CD8B2A6NJW9 211 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 ASB14A6NK59 587 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 HNRNPCL3B7ZW38 293 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 RHOBTB1O94844 696 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 HNRNPCL4P0DMR1 293 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 VDRP11473 427 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 HOXC13P31276 330 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 BRWD1-AS2P59051 145 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 SCN1BQ07699 218 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 SLC20A2Q08357 652 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 TRAF2Q12933 501 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 PRKAA1Q13131 559 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 PTK6Q13882 451 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 CKAP5Q14008 2032 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 IGFBP7Q16270 282 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 OR7E24Q6IFN5 339 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 Q75L30 129 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 GET4Q7L5D6 327 aaPredicted RBP4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 SPATA21Q7Z572 469 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 DZIP1Q86YF9 867 aaKnown RBP4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 GPATCH11Q8N954 259 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 COLGALT1Q8NBJ5 622 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 OR5M8Q8NGP6 311 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 SPATA22Q8NHS9 363 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 GDAP1Q8TB36 358 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 ROBO4Q8WZ75 1007 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 SMPDL3BQ92485 455 aa4.59□□□□□ -1.67
SSX2IP-208ENST00000490476 FGF14Q92915 247 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms