RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 MCEMP1Q8IX19 187 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 BEST3Q8N1M1 668 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 MAGOHBQ96A72 148 aaKnown RBP17.38■□□□□ 0.37
HDAC6-231ENST00000488905 CCDC138Q96M89 665 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 SH3BGRL2Q9UJC5 107 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 ADAMTS6Q9UKP5 1117 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 PCDHGB6Q9Y5F9 930 aa17.38■□□□□ 0.37
HDAC6-231ENST00000488905 FEZF1A0PJY2 475 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 OR2W5A6NFC9 320 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 CCL21O00585 134 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 RDH16O75452 317 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 C8GP07360 202 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 GRNP28799 593 aaKnown RBP17.37■□□□□ 0.37
HDAC6-231ENST00000488905 HSP90AA5PQ58FG0 334 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 ACER2Q5QJU3 275 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 RPTNQ6XPR3 784 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 ASPGQ86U10 573 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 C17orf64Q86WR6 236 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 PDSS2Q86YH6 399 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 RASGEF1CQ8N431 466 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 ZNF808Q8N4W9 903 aaPredicted RBP17.37■□□□□ 0.37
HDAC6-231ENST00000488905 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.37■□□□□ 0.37
HDAC6-231ENST00000488905 TM4SF19Q96DZ7 209 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 MOCOSQ96EN8 888 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 ZNF354BQ96LW1 612 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 NDNQ99608 321 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 RBCK1Q9BYM8 510 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 KCNK13Q9HB14 408 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 PDE10AQ9Y233 779 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 NEU2Q9Y3R4 380 aa17.37■□□□□ 0.37
HDAC6-231ENST00000488905 SLC35G6P0C7Q6 338 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 CDH1P12830 882 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 CCND1P24385 295 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 RGS4P49798 205 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 TUBA3CQ13748 450 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 EXT1Q16394 746 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 CAPN13Q6MZZ7 669 aaPredicted RBP17.36■□□□□ 0.37
HDAC6-231ENST00000488905 UGT3A1Q6NUS8 523 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 TUBA3EQ6PEY2 450 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 CCDC137Q6PK04 289 aaKnown RBP17.36■□□□□ 0.37
HDAC6-231ENST00000488905 AGTRAPQ6RW13 159 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 BNC2Q6ZN30 1099 aaPredicted RBP17.36■□□□□ 0.37
HDAC6-231ENST00000488905 MRGPRGQ86SM5 289 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 SLC26A11Q86WA9 606 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 CRLF3Q8IUI8 442 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 NAT8LQ8N9F0 302 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 KCT2Q8NC54 265 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 MDS2Q8NDY4 140 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 EEF1AKMT1Q8WVE0 214 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 SLC13A3Q8WWT9 602 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 SIGLEC10Q96LC7 697 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 SIGLEC12Q96PQ1 595 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 SGPP1Q9BX95 441 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 FAM129AQ9BZQ8 928 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 ATG10Q9H0Y0 220 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 RUBCNLQ9H714 662 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 PARVBQ9HBI1 364 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 MMP25Q9NPA2 562 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 IARS2Q9NSE4 1012 aaKnown RBP17.36■□□□□ 0.37
HDAC6-231ENST00000488905 NAALAD2Q9Y3Q0 740 aa17.36■□□□□ 0.37
HDAC6-231ENST00000488905 ZNF860A6NHJ4 632 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 SLC19A2O60779 497 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 GRK3P35626 688 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 TIAL1Q01085 375 aaKnown RBP eCLIP17.35■□□□□ 0.373e-9■□□□□ 10.5
HDAC6-231ENST00000488905 RHAGQ02094 409 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 DHX9Q08211 1270 aaKnown RBP17.35■□□□□ 0.37
HDAC6-231ENST00000488905 NAE1Q13564 534 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 CRYMQ14894 314 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 ABRAXAS2Q15018 415 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 CYP1B1Q16678 543 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 MEP1AQ16819 746 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 SFT2D3Q587I9 215 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 PAPD4Q6PIY7 484 aaKnown RBP17.35■□□□□ 0.37
HDAC6-231ENST00000488905 LCTLQ6UWM7 567 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 PALM2Q8IXS6 379 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 MYO1HQ8N1T3 1032 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 C2CD4AQ8NCU7 369 aaPredicted RBP17.35■□□□□ 0.37
HDAC6-231ENST00000488905 M1APQ8TC57 530 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 MS4A14Q96JA4 679 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 OR1F2PQ96R84 312 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 NPAS2Q99743 824 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 HES7Q9BYE0 225 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 TAS2R13Q9NYV9 303 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 SLC22A7Q9Y694 548 aa17.35■□□□□ 0.37
HDAC6-231ENST00000488905 SLC16A5O15375 505 aa17.34■□□□□ 0.37
HDAC6-231ENST00000488905 TTI1O43156 1089 aa17.34■□□□□ 0.37
HDAC6-231ENST00000488905 LCMT2O60294 686 aaKnown RBP17.34■□□□□ 0.37
HDAC6-231ENST00000488905 CDC123O75794 336 aaPredicted RBP17.34■□□□□ 0.37
HDAC6-231ENST00000488905 PGAM1P18669 254 aa17.34■□□□□ 0.37
HDAC6-231ENST00000488905 ELAVL4P26378 380 aaKnown RBP17.34■□□□□ 0.37
HDAC6-231ENST00000488905 CASP6P55212 293 aa17.34■□□□□ 0.37
HDAC6-231ENST00000488905 OR1C1Q15619 314 aa17.34■□□□□ 0.37
HDAC6-231ENST00000488905 PHKG1Q16816 387 aa17.34■□□□□ 0.37
HDAC6-231ENST00000488905 MFSD9Q8NBP5 474 aa17.34■□□□□ 0.37
HDAC6-231ENST00000488905 TSLPQ969D9 159 aa17.34■□□□□ 0.37
HDAC6-231ENST00000488905 ALKBH8Q96BT7 664 aaKnown RBP17.34■□□□□ 0.37
HDAC6-231ENST00000488905 LINGO1Q96FE5 620 aa17.34■□□□□ 0.37
HDAC6-231ENST00000488905 SCMH1Q96GD3 660 aa17.34■□□□□ 0.37
HDAC6-231ENST00000488905 PEX11GQ96HA9 241 aa17.34■□□□□ 0.37
HDAC6-231ENST00000488905 MAGED4Q96JG8 741 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms