RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 IQCCQ4KMZ1 466 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 ZNF658BQ4V348 819 aaPredicted RBP13.7□□□□□ -0.22
ABCB1-207ENST00000488737 BCL7AQ4VC05 210 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 KIAA1614Q5VZ46 1190 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 SVOPQ8N4V2 548 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 KLHL23Q8NBE8 558 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 GOT1L1Q8NHS2 421 aaPredicted RBP13.7□□□□□ -0.22
ABCB1-207ENST00000488737 CYB5D2Q8WUJ1 264 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 RORBQ92753 470 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 AP2M1Q96CW1 435 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 C7orf34Q96L11 122 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 DPH2Q9BQC3 489 aaPredicted RBP13.7□□□□□ -0.22
ABCB1-207ENST00000488737 CCDC90BQ9GZT6 254 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 CRISPLD2Q9H0B8 497 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 KRT84Q9NSB2 600 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 B3GNT3Q9Y2A9 372 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 NOTCH4Q99466 2003 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 ZNF197O14709 1029 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 SLC22A1O15245 554 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 SUV39H1O43463 412 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 XPNPEP2O43895 674 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 CBFA2T3O75081 653 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 INMTO95050 263 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 TIMP1P01033 207 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 CSF2RAP15509 400 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 SYN1P17600 705 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 HOXA9P31269 272 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 RPL3P39023 403 aaKnown RBP13.7□□□□□ -0.22
ABCB1-207ENST00000488737 CSNK2BP67870 215 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 AQP6Q13520 282 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 SIM2Q14190 667 aaPredicted RBP13.7□□□□□ -0.22
ABCB1-207ENST00000488737 NPTX1Q15818 432 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 CTF1Q16619 201 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 HKDC1Q2TB90 917 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 PDE12Q6L8Q7 609 aaKnown RBP13.7□□□□□ -0.22
ABCB1-207ENST00000488737 TMEM220Q6QAJ8 160 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 PARP8Q8N3A8 854 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 C11orf65Q8NCR3 313 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 IPCEF1Q8WWN9 437 aaPredicted RBP13.7□□□□□ -0.22
ABCB1-207ENST00000488737 EFCAB11Q9BUY7 163 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 MCOLN1Q9GZU1 580 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 EXD2Q9NVH0 621 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 THUMPD1Q9NXG2 353 aaKnown RBP13.7□□□□□ -0.22
ABCB1-207ENST00000488737 FAM8A1Q9UBU6 413 aa13.7□□□□□ -0.22
ABCB1-207ENST00000488737 LRRK1Q38SD2 2015 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 H3BM21 787 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 SLC9A3R1O14745 358 aaPredicted RBP13.69□□□□□ -0.22
ABCB1-207ENST00000488737 PCDH7O60245 1069 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 C1orf105O95561 183 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 FMO3P31513 532 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 RPS13P62277 151 aaKnown RBP13.69□□□□□ -0.22
ABCB1-207ENST00000488737 KCNJ10P78508 379 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 SPCS2Q15005 226 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 LAPTM4AQ15012 233 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 MAD2L1BPQ15013 274 aaPredicted RBP13.69□□□□□ -0.22
ABCB1-207ENST00000488737 PROX2Q3B8N5 592 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 ANKDD1AQ495B1 522 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 SYT6Q5T7P8 510 aaPredicted RBP13.69□□□□□ -0.22
ABCB1-207ENST00000488737 ATG16L2Q8NAA4 619 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 WFIKKN2Q8TEU8 576 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 ABTB1Q969K4 478 aaPredicted RBP13.69□□□□□ -0.22
ABCB1-207ENST00000488737 DTD2Q96FN9 168 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 DOHHQ9BU89 302 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 GABARAPL3Q9BY60 117 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 ZCCHC2Q9C0B9 1178 aaKnown RBP13.69□□□□□ -0.22
ABCB1-207ENST00000488737 EHD1Q9H4M9 534 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 REEP4Q9H6H4 257 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 NECTIN3Q9NQS3 549 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 ATAD3AQ9NVI7 634 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 PCDHGB3Q9Y5G1 929 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 PCDHGA10Q9Y5H3 936 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 ALPK3Q96L96 1907 aa13.69□□□□□ -0.22
ABCB1-207ENST00000488737 GNG14A0A1W2PPG7 69 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 DIRAS1O95057 198 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 RHOP08100 348 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 CYP4B1P13584 511 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 PTX3P26022 381 aaPredicted RBP13.68□□□□□ -0.22
ABCB1-207ENST00000488737 HTRA4P83105 476 aaPredicted RBP13.68□□□□□ -0.22
ABCB1-207ENST00000488737 IL1RL1Q01638 556 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 RBBP4Q09028 425 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 ZNF763Q0D2J5 394 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 NPRL3Q12980 569 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 GAB1Q13480 694 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 PAGE2BQ5JRK9 111 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 C16orf87Q6PH81 154 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 ZNF765Q7L2R6 523 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 GALNT10Q86SR1 603 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 LAS2Q8IYD9 372 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 LILRA3Q8N6C8 439 aaPredicted RBP13.68□□□□□ -0.22
ABCB1-207ENST00000488737 ABHD11Q8NFV4 315 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 OR4A15Q8NGL6 344 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.68□□□□□ -0.22
ABCB1-207ENST00000488737 GIPC3Q8TF64 312 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 ZNF480Q8WV37 535 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 SORCS1Q8WY21 1168 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 MYLIPQ8WY64 445 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 NEIL2Q969S2 332 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 COQ10AQ96MF6 247 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 TCF25Q9BQ70 676 aa13.68□□□□□ -0.22
ABCB1-207ENST00000488737 TMEM106CQ9BVX2 250 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms