RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 FRMD8P1Q9BZ68 369 aaPredicted RBP6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 GBA3Q9H227 469 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 DUSP22Q9NRW4 184 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 VPS45Q9NRW7 570 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 RSPH14Q9UHP6 348 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 GMEB2Q9UKD1 530 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 NFU1Q9UMS0 254 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 C19orf53Q9UNZ5 99 aaPredicted RBP6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 HS3ST3A1Q9Y663 406 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 SAR1BQ9Y6B6 198 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 PCNX1Q96RV3 2341 aa6.09□□□□□ -1.43
RTFDC1-209ENST00000487211 PLXND1Q9Y4D7 1925 aa6.09□□□□□ -1.44
RTFDC1-209ENST00000487211 TLN1Q9Y490 2541 aaKnown RBP6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 TRPM6Q9BX84 2022 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 LNP1A1A4G5 178 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 CTAGE9A4FU28 777 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 EFCAB8A8MWE9 144 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 B9A039 149 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 H0Y3Z8 333 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 PRAMEF26H0Y7S4 382 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 H0YIZ8 118 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 TLR4O00206 839 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 PGRMC1O00264 195 aaKnown RBP6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 VILLO15195 856 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 CTIFO43310 598 aaKnown RBP6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 TMPRSS11DO60235 418 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 LRP3O75074 770 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 USP12O75317 370 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 FAM155BO75949 473 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 IFNB1P01574 187 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 PRB1P04280 392 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 NPSP0C0P6 89 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 GNSP15586 552 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 TCP1P17987 556 aaKnown RBP6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 HNRNPA2B1P22626 353 aaKnown RBP6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 CD38P28907 300 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 CASQ1P31415 396 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 HOXD12P35452 270 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 GRIA1P42261 906 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 GEMP55040 296 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 PFN3P60673 137 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 RPL26P61254 145 aaKnown RBP6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 TRIP13Q15645 432 aaPredicted RBP6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 SLC1A5Q15758 541 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 KIF19Q2TAC6 998 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 SETMARQ53H47 684 aaPredicted RBP6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 SIRPB2Q5JXA9 342 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 TPRG1LQ5T0D9 272 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 FAM90A2PQ658T7 463 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 LRRC66Q68CR7 880 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 DENND2CQ68D51 928 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 ITPRIPL1Q6GPH6 555 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 NAPEPLDQ6IQ20 393 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 ANKRD16Q6P6B7 361 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 GCNT7Q6ZNI0 430 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 Q6ZSR6 202 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 SLC25A41Q8N5S1 370 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 PAF1Q8N7H5 531 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 IPMKQ8NFU5 416 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 OR6Y1Q8NGX8 325 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 CEP76Q8TAP6 659 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 MAIP1Q8WWC4 291 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 CAPZA3Q96KX2 299 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 UBXN10Q96LJ8 280 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 APOL2Q9BQE5 337 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 ADGRE3Q9BY15 652 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 CCDC134Q9H6E4 229 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 IL21RQ9HBE5 538 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 MAGEE1Q9HCI5 957 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 HAUS2Q9NVX0 235 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 RPL26L1Q9UNX3 145 aaKnown RBP6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 AAR2Q9Y312 384 aaKnown RBP6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 PI4KAP42356 2102 aa6.08□□□□□ -1.44
RTFDC1-209ENST00000487211 CEP192Q8TEP8 1941 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 TCRBV7S3A2A0A539 114 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 BUD23O43709 281 aaKnown RBP6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 ANXA9O76027 345 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 ELFN1P0C7U0 828 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 CYP2A6P11509 494 aaPredicted RBP6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 ZNF37AP17032 561 aaPredicted RBP6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 AKT2P31751 481 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 TRIM23P36406 574 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 NUDT1P36639 197 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 STC1P52823 247 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 EEFSECP57772 596 aaKnown RBP6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 PSG6Q00889 435 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 SF3A3Q12874 501 aaKnown RBP eCLIP6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 PRPSAP1Q14558 356 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 PTPRCAPQ14761 206 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 IRF4Q15306 451 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 SHBQ15464 509 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 HLA-BQ31612 363 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 PCID2Q5JVF3 399 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 LCE3BQ5TA77 95 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 HECTD2Q5U5R9 776 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 KCTD16Q68DU8 428 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 PNCKQ6P2M8 343 aa6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 CCDC137Q6PK04 289 aaKnown RBP6.07□□□□□ -1.44
RTFDC1-209ENST00000487211 GSTA5Q7RTV2 222 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms