RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ZNF17P17021 662 aa2.02□□□□□ -2.09
HPS3-205ENST00000478525 FASP25445 335 aa2.02□□□□□ -2.09
HPS3-205ENST00000478525 PSMB10P40306 273 aa2.02□□□□□ -2.09
HPS3-205ENST00000478525 SLC1A4P43007 532 aa2.02□□□□□ -2.09
HPS3-205ENST00000478525 MPP1Q00013 466 aa2.02□□□□□ -2.09
HPS3-205ENST00000478525 HSPB3Q12988 150 aa2.02□□□□□ -2.09
HPS3-205ENST00000478525 NPTX1Q15818 432 aa2.02□□□□□ -2.09
HPS3-205ENST00000478525 FGD3Q5JSP0 725 aa2.02□□□□□ -2.09
HPS3-205ENST00000478525 MCM10Q7L590 875 aa2.02□□□□□ -2.09
HPS3-205ENST00000478525 NAXDQ8IW45 347 aa2.02□□□□□ -2.09
HPS3-205ENST00000478525 RPAP2Q8IXW5 612 aaPredicted RBP2.02□□□□□ -2.09
HPS3-205ENST00000478525 OR10S1Q8NGN2 331 aa2.02□□□□□ -2.09
HPS3-205ENST00000478525 ROBO4Q8WZ75 1007 aa2.02□□□□□ -2.09
HPS3-205ENST00000478525 MOB3AQ96BX8 217 aa2.02□□□□□ -2.09
HPS3-205ENST00000478525 SLC2A11Q9BYW1 496 aa2.02□□□□□ -2.09
HPS3-205ENST00000478525 ZNF275Q9NSD4 429 aaPredicted RBP2.02□□□□□ -2.09
HPS3-205ENST00000478525 RNF150Q9ULK6 438 aa2.02□□□□□ -2.09
HPS3-205ENST00000478525 CLEC4EQ9ULY5 219 aa2.02□□□□□ -2.09
HPS3-205ENST00000478525 GTF2A1LQ9UNN4 478 aa2.02□□□□□ -2.09
HPS3-205ENST00000478525 SALL1Q9NSC2 1324 aa2.01□□□□□ -2.09
HPS3-205ENST00000478525 PGPEP1LA6NFU8 196 aa2.01□□□□□ -2.09
HPS3-205ENST00000478525 CD1DP15813 335 aa2.01□□□□□ -2.09
HPS3-205ENST00000478525 CETN2P41208 172 aa2.01□□□□□ -2.09
HPS3-205ENST00000478525 MATR3P43243 847 aaKnown RBP eCLIP2.01□□□□□ -2.09
HPS3-205ENST00000478525 CLDN15P56746 228 aa2.01□□□□□ -2.09
HPS3-205ENST00000478525 NAAAQ02083 359 aa2.01□□□□□ -2.09
HPS3-205ENST00000478525 CKAP4Q07065 602 aaKnown RBP2.01□□□□□ -2.09
HPS3-205ENST00000478525 RASGEF1BQ0VAM2 473 aa2.01□□□□□ -2.09
HPS3-205ENST00000478525 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
HPS3-205ENST00000478525 CYB5D1Q6P9G0 228 aa2.01□□□□□ -2.09
HPS3-205ENST00000478525 GBP7Q8N8V2 638 aaPredicted RBP2.01□□□□□ -2.09
HPS3-205ENST00000478525 MCUQ8NE86 351 aa2.01□□□□□ -2.09
HPS3-205ENST00000478525 NFAM1Q8NET5 270 aaPredicted RBP2.01□□□□□ -2.09
HPS3-205ENST00000478525 OR5M9Q8NGP3 310 aa2.01□□□□□ -2.09
HPS3-205ENST00000478525 PPP1R16AQ96I34 528 aa2.01□□□□□ -2.09
HPS3-205ENST00000478525 MAPKAP1Q9BPZ7 522 aa2.01□□□□□ -2.09
HPS3-205ENST00000478525 RAVER2Q9HCJ3 691 aaKnown RBP2.01□□□□□ -2.09
HPS3-205ENST00000478525 PRMT7Q9NVM4 692 aaPredicted RBP2.01□□□□□ -2.09
HPS3-205ENST00000478525 PILRBQ9UKJ0 227 aa2.01□□□□□ -2.09
HPS3-205ENST00000478525 RPS6KL1Q9Y6S9 549 aa2.01□□□□□ -2.09
HPS3-205ENST00000478525 NPHP3Q7Z494 1330 aa2□□□□□ -2.09
HPS3-205ENST00000478525 A0A087X0M5 115 aa2□□□□□ -2.09
HPS3-205ENST00000478525 A0A1B0GX30 115 aa2□□□□□ -2.09
HPS3-205ENST00000478525 SNX3O60493 162 aa2□□□□□ -2.09
HPS3-205ENST00000478525 PTP4A3O75365 173 aa2□□□□□ -2.09
HPS3-205ENST00000478525 HCKP08631 526 aa2□□□□□ -2.09
HPS3-205ENST00000478525 GPX3P22352 226 aa2□□□□□ -2.09
HPS3-205ENST00000478525 NRIP1P48552 1158 aa2□□□□□ -2.09
HPS3-205ENST00000478525 LHX1P48742 406 aa2□□□□□ -2.09
HPS3-205ENST00000478525 ZNF75DP51815 510 aa2□□□□□ -2.09
HPS3-205ENST00000478525 ZNF133P52736 654 aaPredicted RBP2□□□□□ -2.09
HPS3-205ENST00000478525 IST1P53990 364 aa2□□□□□ -2.09
HPS3-205ENST00000478525 KNOP1Q1ED39 458 aaKnown RBP2□□□□□ -2.09
HPS3-205ENST00000478525 POM121L1PQ3SYA9 428 aa2□□□□□ -2.09
HPS3-205ENST00000478525 CGB2Q6NT52 195 aa2□□□□□ -2.09
HPS3-205ENST00000478525 TIFABQ6ZNK6 161 aa2□□□□□ -2.09
HPS3-205ENST00000478525 RASGEF1AQ8N9B8 481 aa2□□□□□ -2.09
HPS3-205ENST00000478525 CASP10Q92851 521 aa2□□□□□ -2.09
HPS3-205ENST00000478525 TSACCQ96A04 125 aaPredicted RBP2□□□□□ -2.09
HPS3-205ENST00000478525 CTRCQ99895 268 aa2□□□□□ -2.09
HPS3-205ENST00000478525 EBF4Q9BQW3 602 aa2□□□□□ -2.09
HPS3-205ENST00000478525 UNC45AQ9H3U1 944 aa2□□□□□ -2.09
HPS3-205ENST00000478525 PLSCR3Q9NRY6 295 aa2□□□□□ -2.09
HPS3-205ENST00000478525 VNN3Q9NY84 501 aa2□□□□□ -2.09
HPS3-205ENST00000478525 RSPH14Q9UHP6 348 aa2□□□□□ -2.09
HPS3-205ENST00000478525 SPATA2Q9UM82 520 aa2□□□□□ -2.09
HPS3-205ENST00000478525 TRAV9-2A0A087WT02 112 aa1.99□□□□□ -2.09
HPS3-205ENST00000478525 SRPX2O60687 465 aaPredicted RBP1.99□□□□□ -2.09
HPS3-205ENST00000478525 ZNF853P0CG23 659 aa1.99□□□□□ -2.09
HPS3-205ENST00000478525 GIFP27352 417 aa1.99□□□□□ -2.09
HPS3-205ENST00000478525 NONOQ15233 471 aaKnown RBP eCLIP1.99□□□□□ -2.09
HPS3-205ENST00000478525 SPANXN4Q5MJ08 99 aa1.99□□□□□ -2.09
HPS3-205ENST00000478525 C9orf129Q5T035 196 aaKnown RBP1.99□□□□□ -2.09
HPS3-205ENST00000478525 CPEB2Q7Z5Q1 589 aaKnown RBP1.99□□□□□ -2.09
HPS3-205ENST00000478525 ZNF525Q8N782 197 aa1.99□□□□□ -2.09
HPS3-205ENST00000478525 OR4C15Q8NGM1 316 aa1.99□□□□□ -2.09
HPS3-205ENST00000478525 LINC01006Q8NI28 216 aa1.99□□□□□ -2.09
HPS3-205ENST00000478525 ZNF622Q969S3 477 aaKnown RBP eCLIP1.99□□□□□ -2.09
HPS3-205ENST00000478525 CFAP57Q96MR6 1250 aa1.99□□□□□ -2.09
HPS3-205ENST00000478525 RUNDC3BQ96NL0 473 aa1.99□□□□□ -2.09
HPS3-205ENST00000478525 RTBDNQ9BSG5 229 aaPredicted RBP1.99□□□□□ -2.09
HPS3-205ENST00000478525 MAK16Q9BXY0 300 aaKnown RBP1.99□□□□□ -2.09
HPS3-205ENST00000478525 CDH20Q9HBT6 801 aa1.99□□□□□ -2.09
HPS3-205ENST00000478525 ARMCX1Q9P291 453 aa1.99□□□□□ -2.09
HPS3-205ENST00000478525 POLLQ9UGP5 575 aa1.99□□□□□ -2.09
HPS3-205ENST00000478525 IL36AQ9UHA7 158 aa1.99□□□□□ -2.09
HPS3-205ENST00000478525 FBXL4Q9UKA2 621 aa1.99□□□□□ -2.09
HPS3-205ENST00000478525 RNF123Q5XPI4 1314 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 LOC100509620A0A075B734 347 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 A0A1W2PPM1 405 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 A0A1W2PQ09 198 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 TNFSF11O14788 317 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 GJB3O75712 270 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 ATP6AP2O75787 350 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 OR6B1O95007 311 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 IGHG1P01857 330 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 PFKFB1P16118 471 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 EPCAMP16422 314 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 CD22P20273 847 aa1.98□□□□□ -2.09
HPS3-205ENST00000478525 FCGR2BP31994 310 aaPredicted RBP1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms