RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 A0A1B0GVM2 712 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 LINC01553A4QN01 128 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 NPIPB15A6NHN6 443 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 SMLR1H3BR10 107 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 SLC1A7O00341 560 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 CTDSP2O14595 271 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TSPAN6O43657 245 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 PCCBP05166 539 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 C8AP07357 584 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ZNF8P17098 575 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 GADD45AP24522 165 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 PDHA2P29803 388 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 HPCAL1P37235 193 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TAS2R50P59544 299 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 RPP38P78345 283 aaKnown RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 MVKQ03426 396 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TARDBPQ13148 414 aaKnown RBP eCLIP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 SLC14A1Q13336 389 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 NKG7Q16617 165 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 PARP15Q460N3 678 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 CYBRD1Q53TN4 286 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ARMCX4Q5H9R4 360 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 LHFPL3Q86UP9 236 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 OR4N5Q8IXE1 308 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 LINC00471Q8N535 108 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 NLGN4YQ8NFZ3 816 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ENKURQ8TC29 256 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ZFAND2BQ8WV99 257 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ASZ1Q8WWH4 475 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 IPCEF1Q8WWN9 437 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ROPN1LQ96C74 230 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ZFP3Q96NJ6 502 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 COL21A1Q96P44 957 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 RBM4BQ9BQ04 359 aaKnown RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TMED9Q9BVK6 235 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 RBM4Q9BWF3 364 aaKnown RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 CHIAQ9BZP6 476 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 OR51V1Q9H2C8 321 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TMEM245Q9H330 911 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 CACYBPQ9HB71 228 aaKnown RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TIMMDC1Q9NPL8 285 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 NANSQ9NR45 359 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 MRPL17Q9NRX2 175 aaKnown RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 WSB2Q9NYS7 404 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 MAT2BQ9NZL9 334 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TMEM181Q9P2C4 612 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 CARD8Q9Y2G2 431 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 DERAQ9Y315 318 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 DYRK1BQ9Y463 629 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 COL1A2P08123 1366 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TLX2O43763 284 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 CDC123O75794 336 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 MRPL3P09001 348 aaKnown RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ATXN1LP0C7T5 689 aaKnown RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 HRH2P25021 359 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 CA5AP35218 305 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 IDUAP35475 653 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 BCAP31P51572 246 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ALDH3A2P51648 485 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 CTBSQ01459 385 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 PM20D1Q6GTS8 502 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TMEM53Q6P2H8 277 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 CCDC149Q6ZUS6 474 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 USP45Q70EL2 814 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 AKAP14Q86UN6 197 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ZNF761Q86XN6 746 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 DEFB119Q8N690 84 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TCEANCQ8N8B7 351 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 HMGB4Q8WW32 186 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 HDAC2Q92769 488 aaKnown RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 PPCDCQ96CD2 204 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 VMP1Q96GC9 406 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 BBS4Q96RK4 519 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ATOH8Q96SQ7 321 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 DUSP26Q9BV47 211 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 IL26Q9NPH9 171 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 AIG1Q9NVV5 245 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 SPG21Q9NZD8 308 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 MBD1Q9UIS9 605 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ZNF222Q9UK12 451 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 RIMKLBQ9ULI2 386 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 AKAP6Q13023 2319 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 E7EQ34 232 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 MANBAO00462 879 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 GABRDO14764 452 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 PRKNO60260 465 aaPredicted RBP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 PRAMEF11O60813 436 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 CLDN11O75508 207 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 CYP11A1P05108 521 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 GSTT2P0CG29 244 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 GSTT2BP0CG30 244 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 CDH1P12830 882 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 SOX6P35712 828 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 DCTP40126 519 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 DEFA1P59665 94 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 DEFA3P59666 94 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 VLDLRP98155 873 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 ST3GAL4Q11206 333 aa4.82□□□□□ -1.64
CCDC39-204ENST00000476379 SLBPQ14493 270 aaKnown RBP eCLIP4.82□□□□□ -1.64
CCDC39-204ENST00000476379 TAF1AQ15573 450 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms