RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 SSR2P43308 183 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 ASMTP46597 345 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 SCTRP47872 440 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 ATP4BP51164 291 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 KCNK10P57789 538 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 EMX2Q04743 252 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 E2F2Q14209 437 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 SF3A2Q15428 464 aaKnown RBP9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 MMEL1Q495T6 779 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 TMEM35AQ53FP2 167 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 C6orf136Q5SQH8 315 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 OGFOD2Q6N063 350 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 GUSBP11Q6P575 273 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 CYP20A1Q6UW02 462 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 LARP4Q71RC2 724 aaKnown RBP eCLIP9.84□□□□□ -0.831e-6■□□□□ 10.2
PRPF38A-202ENST00000474048 ABHD13Q7L211 337 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 ZNF438Q7Z4V0 828 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 SPRED1Q7Z699 444 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 CLNKQ7Z7G1 428 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 PAQR7Q86WK9 346 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 NUDT13Q86X67 352 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 PLD3Q8IV08 490 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 FAM20CQ8IXL6 584 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 ZNF740Q8NDX6 193 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 PRSS33Q8NF86 280 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 WDR48Q8TAF3 677 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 BAHD1Q8TBE0 780 aaPredicted RBP9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 IFI44Q8TCB0 444 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 SLC13A3Q8WWT9 602 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 RGMAQ96B86 450 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 C3orf30Q96M34 536 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 GFM1Q96RP9 751 aaKnown RBP9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 DPY30Q9C005 99 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 ROGDIQ9GZN7 287 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 MYLK2Q9H1R3 596 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 RHBGQ9H310 441 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 SEMA4GQ9NTN9 838 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 DNAAF2Q9NVR5 837 aaKnown RBP9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 ARMCX1Q9P291 453 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 KLHL20Q9Y2M5 609 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 AP1M2Q9Y6Q5 423 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 TTC28Q96AY4 2481 aa9.84□□□□□ -0.83
PRPF38A-202ENST00000474048 OR2A25A4D2G3 310 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 EME2A4GXA9 379 aaPredicted RBP9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 SLC9B1P1A6NJY1 282 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 ZSCAN9O15535 394 aaPredicted RBP9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 TNFSF14O43557 240 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 PCDH7O60245 1069 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 PRAMEF4O60810 478 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 SEMA3DO95025 777 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 CPNE6O95741 557 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 CKMT1AP12532 417 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 PVRP15151 417 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 CKMT2P17540 419 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 PRPH2P23942 346 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 HPCAL1P37235 193 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 RPL3P39023 403 aaKnown RBP9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 BCL6P41182 706 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 CLNS1AP54105 237 aaKnown RBP9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 RELAQ04206 551 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 PWP1Q13610 501 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 CUL3Q13618 768 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 UBAP2LQ14157 1087 aaKnown RBP9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 SPIDRQ14159 915 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 NR1D2Q14995 579 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 CSRP2Q16527 193 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 CLPPQ16740 277 aaPredicted RBP9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 NDUFA9Q16795 377 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 AGKQ53H12 422 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 TOR1AIP1Q5JTV8 583 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 IL23RQ5VWK5 629 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 PRAMEF9Q5VWM5 478 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 KHDRBS2Q5VWX1 349 aaKnown RBP9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 NKAIN2Q5VXU1 208 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 TMEM198Q66K66 360 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 ZNF425Q6IV72 752 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 WDR74Q6RFH5 385 aaPredicted RBP9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 KANSL1Q7Z3B3 1105 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 KMT5CQ86Y97 462 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 LIX1Q8N485 282 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 C1orf52Q8N6N3 182 aaKnown RBP9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 TTC29Q8NA56 475 aaPredicted RBP9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 OR2T11Q8NH01 316 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 KCNC2Q96PR1 638 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 PRPF18Q99633 342 aaKnown RBP9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 CDC6Q99741 560 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 MAP3K3Q99759 626 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 MRPL1Q9BYD6 325 aaKnown RBP9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 SLC7A5P2Q9GIP4 190 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 REXO4Q9GZR2 422 aaKnown RBP9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 OR51B5Q9H339 312 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 SAR1AQ9NR31 198 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 AIG1Q9NVV5 245 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 AKAP7Q9P0M2 348 aaPredicted RBP9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 GIMAP2Q9UG22 337 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 PPT2Q9UMR5 302 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 PCDHGA4Q9Y5G9 962 aa9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 COPG1Q9Y678 874 aaKnown RBP9.83□□□□□ -0.84
PRPF38A-202ENST00000474048 SPACA6W5XKT8 324 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms