RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 PRRC2AP48634 2157 aaKnown RBP9.03□□□□□ -0.96
MCF2L-223ENST00000473345 HEATR5BQ9P2D3 2071 aa9.03□□□□□ -0.96
MCF2L-223ENST00000473345 HCFC1P51610 2035 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 FAM90A27PA6NNH2 459 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 USP27XA6NNY8 438 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 BTNL10A8MVZ5 291 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 C4orf51C9J302 202 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 H0YIG0 161 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 AVILO75366 819 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 VPS26AO75436 327 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 VAPBO95292 243 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 NADKO95544 446 aaPredicted RBP9.02□□□□□ -0.97
MCF2L-223ENST00000473345 APRTP07741 180 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 CCDC175P0C221 793 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 ICAM2P13598 275 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 ABOP16442 354 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 MGAT1P26572 445 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 ATP5DP30049 168 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 CCNFP41002 786 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 TTPAP49638 278 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 CASP6P55212 293 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 DLX5P56178 289 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 BTG2P78543 158 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 TIAL1Q01085 375 aaKnown RBP eCLIP9.02□□□□□ -0.97
MCF2L-223ENST00000473345 SNTB1Q13884 538 aaKnown RBP9.02□□□□□ -0.97
MCF2L-223ENST00000473345 MAPKAPK3Q16644 382 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 MEP1AQ16819 746 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 LONRF1Q17RB8 773 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 ANKRD20A4Q4UJ75 823 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 PCID2Q5JVF3 399 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 TTC23LQ6PF05 361 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 C16orf47Q6ZP98 133 aaPredicted RBP9.02□□□□□ -0.97
MCF2L-223ENST00000473345 DMRTC2Q8IXT2 367 aaPredicted RBP9.02□□□□□ -0.97
MCF2L-223ENST00000473345 AGGF1Q8N302 714 aaeCLIP9.02□□□□□ -0.978e-7■□□□□ 10.2
MCF2L-223ENST00000473345 NFAM1Q8NET5 270 aaPredicted RBP9.02□□□□□ -0.97
MCF2L-223ENST00000473345 OR52N2Q8NGI0 321 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 M1APQ8TC57 530 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 CHTF18Q8WVB6 975 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 PEX11GQ96HA9 241 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 PANX3Q96QZ0 392 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 AICDAQ9GZX7 198 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 SPNS1Q9H2V7 528 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 TRIM45Q9H8W5 580 aaPredicted RBP9.02□□□□□ -0.97
MCF2L-223ENST00000473345 GPAMQ9HCL2 828 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 DEPPQ9NTK1 212 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 LRFN1Q9P244 771 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 ZNF223Q9UK11 482 aaPredicted RBP9.02□□□□□ -0.97
MCF2L-223ENST00000473345 ADAMTS6Q9UKP5 1117 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 RNF6Q9Y252 685 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 CAPN6Q9Y6Q1 641 aa9.02□□□□□ -0.97
MCF2L-223ENST00000473345 A0A0G2JMM0 328 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 A0A1W2PPB8 328 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 A0A1W2PRS3 328 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 GOLGA6L9A6NEM1 432 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 ERI2A8K979 691 aaKnown RBP9.01□□□□□ -0.97
MCF2L-223ENST00000473345 KIR3DP1A8MWS1 328 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 GFYI3L273 518 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 PRPF4O43172 522 aaKnown RBP eCLIP9.01□□□□□ -0.972e-6■■■□□ 15.4
MCF2L-223ENST00000473345 ZSCAN12O43309 604 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 HS6ST1O60243 411 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 PRKNO60260 465 aaPredicted RBP9.01□□□□□ -0.97
MCF2L-223ENST00000473345 NDUFS3O75489 264 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 SLC25A12O75746 678 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 CD46P15529 392 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 ZNF24P17028 368 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 MSX1P28360 303 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 FDFT1P37268 417 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 SKIV2L2P42285 1042 aaKnown RBP9.01□□□□□ -0.97
MCF2L-223ENST00000473345 PGGT1BP53609 377 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 ITGA8P53708 1063 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 MLF1P58340 268 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 GPR85P60893 370 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 MEF2AQ02078 507 aaPredicted RBP9.01□□□□□ -0.97
MCF2L-223ENST00000473345 OC90Q02509 493 aaPredicted RBP9.01□□□□□ -0.97
MCF2L-223ENST00000473345 RELAQ04206 551 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 ARHGAP19Q14CB8 494 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 ABRAXAS2Q15018 415 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 AARS2Q5JTZ9 985 aaKnown RBP9.01□□□□□ -0.97
MCF2L-223ENST00000473345 PIWIL4Q7Z3Z4 852 aaKnown RBP9.01□□□□□ -0.97
MCF2L-223ENST00000473345 MDGA2Q7Z553 956 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 ADCK2Q7Z695 626 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 SLC26A11Q86WA9 606 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 LIX1LQ8IVB5 337 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 DENND6AQ8IWF6 608 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 SULF2Q8IWU5 870 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 GHDCQ8N2G8 530 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 C17orf53Q8N3J3 647 aaPredicted RBP9.01□□□□□ -0.97
MCF2L-223ENST00000473345 PRELID2Q8N945 189 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 PLPP5Q8NEB5 264 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 PPHLN1Q8NEY8 458 aaKnown RBP9.01□□□□□ -0.97
MCF2L-223ENST00000473345 FAM57AQ8TBR7 257 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 CA5BP1Q8WTZ4 195 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 ASB11Q8WXH4 323 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 PEX13Q92968 403 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 HES6Q96HZ4 224 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 TTC1Q99614 292 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 DESI2Q9BSY9 194 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 KIFC1Q9BW19 673 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 TSSK1BQ9BXA7 367 aa9.01□□□□□ -0.97
MCF2L-223ENST00000473345 CXXC4Q9H2H0 198 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms