RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 DNAJC4Q9NNZ3 241 aa2.11□□□□□ -2.07
GTF3C3-209ENST00000466862 PDE7BQ9NP56 450 aa2.11□□□□□ -2.07
GTF3C3-209ENST00000466862 IL1RAPQ9NPH3 570 aa2.11□□□□□ -2.07
GTF3C3-209ENST00000466862 HAO2Q9NYQ3 351 aa2.11□□□□□ -2.07
GTF3C3-209ENST00000466862 CLIC5Q9NZA1 410 aa2.11□□□□□ -2.07
GTF3C3-209ENST00000466862 HACD3Q9P035 362 aa2.11□□□□□ -2.07
GTF3C3-209ENST00000466862 ADD3Q9UEY8 706 aaKnown RBP2.11□□□□□ -2.07
GTF3C3-209ENST00000466862 VPS28Q9UK41 221 aa2.11□□□□□ -2.07
GTF3C3-209ENST00000466862 PILRBQ9UKJ0 227 aa2.11□□□□□ -2.07
GTF3C3-209ENST00000466862 MRPS18CQ9Y3D5 142 aaKnown RBP2.11□□□□□ -2.07
GTF3C3-209ENST00000466862 NEDD4P46934 1319 aa2.11□□□□□ -2.07
GTF3C3-209ENST00000466862 TRAV24A0A0B4J272 114 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 hCG_1807616A0A1W2PRN6 198 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 FAM168BA1KXE4 195 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 FSD2A1L4K1 749 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 FAM220BPB1ANY3 271 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 F8VVB4 439 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 F8VWA3 439 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 IPO8O15397 1037 aaKnown RBP2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 SNX3O60493 162 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 ATP5BP06576 529 aaKnown RBP2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 SAGP10523 405 aaPredicted RBP2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 PORP16435 677 aaPredicted RBP2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 C4BPBP20851 252 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 MATR3P43243 847 aaKnown RBP eCLIP2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 ASCL1P50553 236 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 POLR2LP62875 67 aaKnown RBP2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 SRPXP78539 464 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 NUCB1Q02818 461 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 CHAF1BQ13112 559 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 RUNX3Q13761 415 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 FAM106AQ4KMX7 169 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 AGAP7PQ5VUJ5 663 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 CATSPER3Q86XQ3 398 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 MAML2Q8IZL2 1156 aaPredicted RBP2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 METTL21AQ8WXB1 218 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 ERP27Q96DN0 273 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 TIGD1Q96MW7 591 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 ZIM3Q96PE6 472 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 FEVQ99581 238 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 NUDT16L1Q9BRJ7 211 aaKnown RBP2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 YTHDF1Q9BYJ9 559 aaKnown RBP2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 PRRG4Q9BZD6 226 aa2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 CNOT10Q9H9A5 744 aaKnown RBP2.1□□□□□ -2.07
GTF3C3-209ENST00000466862 RTCAO00442 366 aaKnown RBP2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 ADAM20O43506 726 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 GFPT2O94808 682 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 GSRP00390 522 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 PKLRP30613 574 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 GPR183P32249 361 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 DRD3P35462 400 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 CCR3P51677 355 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 CLNS1AP54105 237 aaKnown RBP2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 WTAPQ15007 396 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 MLF2Q15773 248 aaPredicted RBP2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 DUSP5Q16690 384 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 ATAD3CQ5T2N8 411 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 LINC00242Q5T6M2 205 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 LEMD1Q68G75 181 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 C16orf54Q6UWD8 224 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 ANKRD33Q7Z3H0 272 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 CCDC60Q8IWA6 550 aaPredicted RBP2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 TSPAN14Q8NG11 270 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 CASP10Q92851 521 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 TSACCQ96A04 125 aaPredicted RBP2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 PTERQ96BW5 349 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 LURAP1Q96LR2 239 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 LRRC3BQ96PB8 259 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 BTBD9Q96Q07 612 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 TAAR6Q96RI8 345 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 NDNQ99608 321 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 ACTL8Q9H568 366 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 GSN-AS1Q9NRJ2 163 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 HAUS2Q9NVX0 235 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 DDX25Q9UHL0 483 aaKnown RBP2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 SLC24A2Q9UI40 661 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 FBXL4Q9UKA2 621 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 CPSF3Q9UKF6 684 aaKnown RBP2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 NAALAD2Q9Y3Q0 740 aa2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 TDRD6O60522 2096 aaKnown RBP2.09□□□□□ -2.07
GTF3C3-209ENST00000466862 CDX4O14627 284 aaPredicted RBP2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 ZNF749O43361 778 aa2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 SPRY1O43609 319 aaPredicted RBP2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 TSPAN9O75954 239 aa2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 SEMA4FO95754 770 aa2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 LY6G6DO95868 133 aa2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 RPLP0P05388 317 aaKnown RBP2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 FAM200BP0CF97 657 aa2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 SAT1P21673 171 aa2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 CHRNA3P32297 505 aa2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 EIF2DP41214 584 aaKnown RBP2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 ELK3P41970 407 aa2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 ERVK-16P61578 105 aa2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 UBXN2AP68543 259 aa2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 RSBN1Q5VWQ0 802 aaPredicted RBP2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 CTR9Q6PD62 1173 aa2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 BRINP3Q76B58 766 aa2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 CAMKMTQ7Z624 323 aa2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 RPAINQ86UA6 219 aa2.08□□□□□ -2.08
GTF3C3-209ENST00000466862 SERINC5Q86VE9 423 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms