RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 GARSP41250 739 aaKnown RBP1.94□□□□□ -2.1
SYPL1-203ENST00000460770 TNNT3P45378 269 aaPredicted RBP1.94□□□□□ -2.1
SYPL1-203ENST00000460770 KHKP50053 298 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 PSMC6P62333 389 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 UBXN2AP68543 259 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 SRSF9Q13242 221 aaKnown RBP eCLIP1.94□□□□□ -2.1
SYPL1-203ENST00000460770 OPCMLQ14982 345 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 UPP1Q16831 310 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 Q1RN00 199 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 RAB41Q5JT25 222 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 C1orf141Q5JVX7 400 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 SLC24A5Q71RS6 500 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 KRT74Q7RTS7 529 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 PRPF39Q86UA1 669 aaKnown RBP1.94□□□□□ -2.1
SYPL1-203ENST00000460770 SERINC5Q86VE9 423 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 IQCA1Q86XH1 822 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 AVL9Q8NBF6 648 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 PTPMT1Q8WUK0 201 aaPredicted RBP1.94□□□□□ -2.1
SYPL1-203ENST00000460770 LPGAT1Q92604 370 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 VMP1Q96GC9 406 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 SDHCQ99643 169 aaPredicted RBP1.94□□□□□ -2.1
SYPL1-203ENST00000460770 APOL2Q9BQE5 337 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 ADPGKQ9BRR6 497 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 APOL6Q9BWW8 343 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 YTHDF1Q9BYJ9 559 aaKnown RBP1.94□□□□□ -2.1
SYPL1-203ENST00000460770 LRRCC1Q9C099 1032 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 SLC39A8Q9C0K1 460 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 OR10A4Q9H209 315 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.94□□□□□ -2.1
SYPL1-203ENST00000460770 SUCLA2Q9P2R7 463 aaPredicted RBP1.94□□□□□ -2.1
SYPL1-203ENST00000460770 IKZF3Q9UKT9 509 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 FAM169AQ9Y6X4 670 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 CROCCQ5TZA2 2017 aa1.94□□□□□ -2.1
SYPL1-203ENST00000460770 GPR75-ASB3A0A0A6YYF3 556 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 IGHV3-38A0A0C4DH36 116 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 TRBV5-5A0A0J9YX44 114 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 SRRM4A7MD48 611 aaKnown RBP1.93□□□□□ -2.1
SYPL1-203ENST00000460770 ENTPD3O75355 529 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 HSP90AB1P08238 724 aaKnown RBP1.93□□□□□ -2.1
SYPL1-203ENST00000460770 MUTP22033 750 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 ELK3P41970 407 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 NRIP1P48552 1158 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 ATP4BP51164 291 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 PPP5CP53041 499 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 KRT83P78385 493 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 NDPQ00604 133 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 AIMP1Q12904 312 aaKnown RBP1.93□□□□□ -2.1
SYPL1-203ENST00000460770 CUL3Q13618 768 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 ITGA7Q13683 1181 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 IGSF11Q5DX21 431 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 KHDRBS2Q5VWX1 349 aaKnown RBP1.93□□□□□ -2.1
SYPL1-203ENST00000460770 TMEM211Q6ICI0 200 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 TEX38Q6PEX7 206 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 SHQ1Q6PI26 577 aaKnown RBP1.93□□□□□ -2.1
SYPL1-203ENST00000460770 NUP54Q7Z3B4 507 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 AACSQ86V21 672 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 VASH2Q86V25 355 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 CHCHD4Q8N4Q1 142 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 RTL3Q8N8U3 475 aaKnown RBP1.93□□□□□ -2.1
SYPL1-203ENST00000460770 MRAPQ8TCY5 172 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 PIK3R3Q92569 461 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 FAM218AQ96MZ4 157 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 JAKMIP1Q96N16 626 aaKnown RBP1.93□□□□□ -2.1
SYPL1-203ENST00000460770 ABHD1Q96SE0 405 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 PAFAH2Q99487 392 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 CDCA3Q99618 268 aaPredicted RBP1.93□□□□□ -2.1
SYPL1-203ENST00000460770 OLFM1Q99784 485 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 TEX12Q9BXU0 123 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 KLHL4Q9C0H6 718 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 RABEP2Q9H5N1 569 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 PDFQ9HBH1 243 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 Q9N2K0 584 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 STAU2Q9NUL3 570 aaKnown RBP eCLIP1.93□□□□□ -2.1
SYPL1-203ENST00000460770 CLEC5AQ9NY25 188 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 ANAPC5Q9UJX4 755 aa1.93□□□□□ -2.1
SYPL1-203ENST00000460770 UMODL1Q5DID0 1318 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 RNF123Q5XPI4 1314 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 PASKQ96RG2 1323 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 COL16A1Q07092 1604 aaPredicted RBP1.92□□□□□ -2.1
SYPL1-203ENST00000460770 OR2A25A4D2G3 310 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 C2CD4DB7Z1M9 353 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 DIAPH2O60879 1101 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 TGDSO95455 350 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 GGPS1O95749 300 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 SUPT20HL2P0C7V6 817 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 FAM200BP0CF97 657 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 PFKFB1P16118 471 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 GPR183P32249 361 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 CAPZA2P47755 286 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 STAT2P52630 851 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 NDUFV3P56181 108 aaKnown RBP1.92□□□□□ -2.1
SYPL1-203ENST00000460770 ACY1Q03154 408 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 SCARB2Q14108 478 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 IRF3Q14653 427 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 CDC37Q16543 378 aaPredicted RBP1.92□□□□□ -2.1
SYPL1-203ENST00000460770 TTC31Q49AM3 519 aaPredicted RBP1.92□□□□□ -2.1
SYPL1-203ENST00000460770 CCDC92Q53HC0 331 aaPredicted RBP1.92□□□□□ -2.1
SYPL1-203ENST00000460770 C2orf83Q53S99 150 aa1.92□□□□□ -2.1
SYPL1-203ENST00000460770 HERC4Q5GLZ8 1057 aaPredicted RBP1.92□□□□□ -2.1
SYPL1-203ENST00000460770 ERMARDQ5T6L9 678 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms