RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 GRHL2Q6ISB3 625 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 SFTPA1Q8IWL2 248 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 REM2Q8IYK8 340 aaPredicted RBP17.48■□□□□ 0.39
HPS3-202ENST00000460120 VN1R2Q8NFZ6 395 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 WDR48Q8TAF3 677 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 MUL1Q969V5 352 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 PAWRQ96IZ0 340 aaKnown RBP17.48■□□□□ 0.39
HPS3-202ENST00000460120 TOX2Q96NM4 488 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 SPASTQ9UBP0 616 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 PNMA8BQ9ULN7 279 aaPredicted RBP17.48■□□□□ 0.39
HPS3-202ENST00000460120 DOLKQ9UPQ8 538 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 MAP4K5Q9Y4K4 846 aa17.48■□□□□ 0.39
HPS3-202ENST00000460120 RANBP2P49792 3224 aaKnown RBP17.47■□□□□ 0.39
HPS3-202ENST00000460120 DNAJA1P31689 397 aaKnown RBP17.47■□□□□ 0.39
HPS3-202ENST00000460120 CRYBA2P53672 197 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 VBP1P61758 197 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 OCA2Q04671 838 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 ITGADQ13349 1161 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 NR1D2Q14995 579 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 ARHGAP15Q53QZ3 475 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 RAET1GQ6H3X3 334 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 SLC16A12Q6ZSM3 486 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 AHSA2Q719I0 299 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 NPAS3Q8IXF0 933 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 GLMNQ92990 594 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 LRRC3BQ96PB8 259 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 FAM120CQ9NX05 1096 aaKnown RBP17.47■□□□□ 0.39
HPS3-202ENST00000460120 ZNF99A8MXY4 864 aaPredicted RBP17.47■□□□□ 0.39
HPS3-202ENST00000460120 M0R129 80 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 C6orf47O95873 294 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 MT-ND2P03891 347 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 HOXA9P31269 272 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 SOAT1P35610 550 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 NDNFQ8TB73 568 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 FAR1Q8WVX9 515 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 TMEM9Q9P0T7 183 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 GULP1Q9UBP9 304 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 CFAP20Q9Y6A4 193 aaKnown RBP17.47■□□□□ 0.39
HPS3-202ENST00000460120 KCNE2Q9Y6J6 123 aa17.47■□□□□ 0.39
HPS3-202ENST00000460120 SLC16A6O15403 523 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 PCMT1P22061 227 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 CREMQ03060 361 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 OR8J2Q8NGG1 315 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 RORBQ92753 470 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 BORCS5Q969J3 196 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 MAGED4Q96JG8 741 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 TRIT1Q9H3H1 467 aaKnown RBP17.46■□□□□ 0.39
HPS3-202ENST00000460120 TMEM184CQ9NVA4 438 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 WASH3PC4AMC7 463 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 NPC1O15118 1278 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 SUV39H1O43463 412 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 MMP20O60882 483 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 POU2F1P14859 743 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 PTPN2P17706 415 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 FPR1P21462 350 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 IDSP22304 550 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 IRS1P35568 1242 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 HBA1P69905 142 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 RGNQ15493 299 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 KDM4DQ6B0I6 523 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 ERAP2Q6P179 960 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 TTC23LQ6PF05 361 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 CBLL1Q75N03 491 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 EIF3MQ7L2H7 374 aaKnown RBP17.46■□□□□ 0.39
HPS3-202ENST00000460120 TECPR1Q7Z6L1 1165 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 CCDC71Q8IV32 467 aaPredicted RBP17.46■□□□□ 0.39
HPS3-202ENST00000460120 SMYD1Q8NB12 490 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 ATL1Q8WXF7 558 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 NXPE3Q969Y0 559 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 FKBP10Q96AY3 582 aa17.46■□□□□ 0.39
HPS3-202ENST00000460120 CXXC1Q9P0U4 656 aaPredicted RBP17.46■□□□□ 0.39
HPS3-202ENST00000460120 SLC5A10A0PJK1 596 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 UGT2B11O75310 529 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 AP2A2O94973 939 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 CEBPBP17676 345 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 FUT4P22083 530 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 CTNNB1P35222 781 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 HPCAL1P37235 193 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 MMP12P39900 470 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 OPRL1P41146 370 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 HNF4AP41235 474 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 VIPR2P41587 438 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 CYP4F2P78329 520 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 ZNF829Q3KNS6 432 aaPredicted RBP17.45■□□□□ 0.38
HPS3-202ENST00000460120 TMEM236Q5W0B7 351 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 MED27Q6P2C8 311 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 CROCCP3Q8IVE0 287 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 TMCO5AQ8N6Q1 288 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 VPS37AQ8NEZ2 397 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 HHIPQ96QV1 700 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 EXO1Q9UQ84 846 aaKnown RBP17.45■□□□□ 0.38
HPS3-202ENST00000460120 TMEM98Q9Y2Y6 226 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 DNAH14Q0VDD8 3507 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 H0YIV9 168 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 CLPXO76031 633 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 KLK1P06870 262 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 KRT20P35900 424 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 DGKGP49619 791 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 PRLHRP49683 370 aa17.45■□□□□ 0.38
HPS3-202ENST00000460120 GABARAPL2P60520 117 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms