RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 NRROSQ86YC3 692 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 NT5DC4Q86YG4 428 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 VRK3Q8IV63 474 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 RNF113BQ8IZP6 322 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 ARL14Q8N4G2 192 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 COMMD1Q8N668 190 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 LFNGQ8NES3 379 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 OR56B4Q8NH76 319 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MARC2Q969Z3 335 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TMIGD2Q96BF3 282 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MUS81Q96NY9 551 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PCYT2Q99447 389 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 POP1Q99575 1024 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 IER2Q9BTL4 223 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 NT5C1AQ9BXI3 368 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 POLR2J2Q9GZM3 115 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 ABCG4Q9H172 646 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CDHR5Q9HBB8 845 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ACOT13Q9NPJ3 140 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TRIM36Q9NQ86 728 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SEMA3GQ9NS98 782 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 LYRM2Q9NU23 88 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 ZSCAN32Q9NX65 697 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 KLHL42Q9P2K6 505 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 NARFQ9UHQ1 456 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PCDHAC2Q9Y5I4 1007 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CNTNAP2Q9UHC6 1331 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CHD4Q14839 1912 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 HSBP1L1C9JCN9 74 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ANKRD63C9JTQ0 380 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 DDX39AO00148 427 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 TLR4O00206 839 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PCDH17O14917 1159 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PPP1R2P9O14990 202 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TCAPO15273 167 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SLC16A4O15374 487 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MMP20O60882 483 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SCGNO76038 276 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 EPOP01588 193 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 RETP07949 1114 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CSF1P09603 554 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 GLI3P10071 1580 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 IL7RP16871 459 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 NAGAP17050 411 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MAGP20916 626 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 C5AR1P21730 350 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 FSHRP23945 695 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PNPLA4P41247 253 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CCR10P46092 362 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 GZMKP49863 264 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF143P52747 638 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 DLX5P56178 289 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CLDN20P56880 219 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CDC42EP1Q00587 391 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SORDQ00796 357 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PPP3CAQ08209 521 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF235Q14590 738 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNHIT3Q15649 155 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 UBE2SQ16763 222 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 MEP1AQ16819 746 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF674Q2M3X9 581 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF831Q5JPB2 1677 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 GCNT6Q5T4J0 391 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ATRNL1Q5VV63 1379 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SLC25A24Q6NUK1 477 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF720Q7Z2F6 126 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 LRRC28Q86X40 367 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 PPP1R3BQ86XI6 285 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CACUL1Q86Y37 369 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 FAM217AQ8IXS0 508 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF567Q8N184 647 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SYNE4Q8N205 404 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SLC44A3Q8N4M1 653 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 NAT16Q8N8M0 369 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 NLGN2Q8NFZ4 835 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TMEM163Q8TC26 289 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 GEMIN6Q8WXD5 167 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 ACOT11Q8WXI4 607 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 SMARCD2Q92925 531 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 EXOSC8Q96B26 276 aaKnown RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 BIRC7Q96CA5 298 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 SCMH1Q96GD3 660 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF419Q96HQ0 510 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 BTN2A3PQ96KV6 586 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 ZNF512Q96ME7 567 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 NECAB3Q96P71 396 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 PNMA5Q96PV4 448 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PPP1R16BQ96T49 567 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 EBF4Q9BQW3 602 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CBWD1Q9BRT8 395 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 PTDSS2Q9BVG9 487 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TOLLIPQ9H0E2 274 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 GABARAPL1Q9H0R8 117 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 LDAHQ9H6V9 325 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 TBC1D17Q9HA65 648 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 GGA3Q9NZ52 723 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 CXXC1Q9P0U4 656 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 SAE1Q9UBE0 346 aaPredicted RBP2.14□□□□□ -2.07
USP53-202ENST00000450251 CKLFQ9UBR5 152 aa2.14□□□□□ -2.07
USP53-202ENST00000450251 EGFL7Q9UHF1 273 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms