RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 PDZK1Q5T2W1 519 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 ADAMTSL2Q86TH1 951 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 LSMEM1Q8N8F7 131 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 OR7D4Q8NG98 312 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 LKAAEAR1Q8TD35 194 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 DIRAS2Q96HU8 199 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 C7orf34Q96L11 122 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 RAD9AQ99638 391 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 TTLL2Q9BWV7 592 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 CIPCQ9C0C6 399 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 MROH8Q9H579 483 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 C3orf14Q9HBI5 128 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 PCDH10Q9P2E7 1040 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 MAN2B2Q9Y2E5 1009 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 PCDHGA2Q9Y5H1 932 aa13.48□□□□□ -0.25
VPS52-212ENST00000445902 LEUTXA8MZ59 168 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 POMCP01189 267 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 TRAPPC2P0DI81 140 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 TRAPPC2BP0DI82 140 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 ACPPP15309 386 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 SDC1P18827 310 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 ERP29P30040 261 aaKnown RBP13.47□□□□□ -0.25
VPS52-212ENST00000445902 RORCP51449 518 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 CLDN8P56748 225 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 KCNJ10P78508 379 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 SPIBQ01892 262 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 GPR162Q16538 588 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 IQCCQ4KMZ1 466 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 FAM205BPQ63HN1 556 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 SERPINA11Q86U17 422 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 RNF130Q86XS8 419 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 SELENOMQ8WWX9 145 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 OPALINQ96PE5 141 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 IL4I1Q96RQ9 567 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 FAM83DQ9H4H8 585 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 HHATLQ9HCP6 504 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.47□□□□□ -0.25
VPS52-212ENST00000445902 SLC23A1Q9UHI7 598 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 CMAHPQ9Y471 501 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 ALG5Q9Y673 324 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 LTBP3Q9NS15 1303 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 STX7O15400 261 aaKnown RBP13.47□□□□□ -0.25
VPS52-212ENST00000445902 EPN2O95208 641 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 TSPAN19P0C672 248 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 LPOP22079 712 aaPredicted RBP13.47□□□□□ -0.25
VPS52-212ENST00000445902 RPS12P25398 132 aaKnown RBP13.47□□□□□ -0.25
VPS52-212ENST00000445902 GPC1P35052 558 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 MLLT3P42568 568 aaPredicted RBP13.47□□□□□ -0.25
VPS52-212ENST00000445902 GZMKP49863 264 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 ARHGEF6Q15052 776 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 TAF1AQ15573 450 aaPredicted RBP13.47□□□□□ -0.25
VPS52-212ENST00000445902 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.47□□□□□ -0.25
VPS52-212ENST00000445902 SAXO2Q658L1 398 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 LGI4Q8N135 537 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 DTX3Q8N9I9 347 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 PCNPQ8WW12 178 aaKnown RBP13.47□□□□□ -0.25
VPS52-212ENST00000445902 TMEM203Q969S6 136 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 APIPQ96GX9 242 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 CRELD1Q96HD1 420 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 BOCQ9BWV1 1114 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 AFF4Q9UHB7 1163 aaKnown RBP13.47□□□□□ -0.25
VPS52-212ENST00000445902 FABP12A6NFH5 140 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 B8ZZF3 427 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 J3KTA2 159 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 FZD9O00144 591 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 SH3BGRLO75368 114 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 GABRB1P18505 474 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 EXOC3L2Q2M3D2 409 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 PTRHD1Q6GMV3 140 aaKnown RBP13.47□□□□□ -0.25
VPS52-212ENST00000445902 FAM171BQ6P995 826 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 ANGPTL8Q6UXH0 198 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 TRIM46Q7Z4K8 759 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 TSEN54Q7Z6J9 526 aaKnown RBP13.47□□□□□ -0.25
VPS52-212ENST00000445902 TMC8Q8IU68 726 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 RDH10Q8IZV5 341 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 KLHDC9Q8NEP7 349 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 NELL1Q92832 810 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 REPS1Q96D71 796 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 EPYCQ99645 322 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 TRIM62Q9BVG3 475 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 ABI2Q9NYB9 513 aaPredicted RBP13.47□□□□□ -0.25
VPS52-212ENST00000445902 PCDHGB3Q9Y5G1 929 aa13.47□□□□□ -0.25
VPS52-212ENST00000445902 A0A1W2PQL4 384 aaPredicted RBP13.46□□□□□ -0.25
VPS52-212ENST00000445902 PLA2G10O15496 165 aa13.46□□□□□ -0.25
VPS52-212ENST00000445902 SUV39H1O43463 412 aa13.46□□□□□ -0.25
VPS52-212ENST00000445902 CDRT1O95170 752 aa13.46□□□□□ -0.25
VPS52-212ENST00000445902 KIR3DL1P43629 444 aa13.46□□□□□ -0.25
VPS52-212ENST00000445902 TARDBPQ13148 414 aaKnown RBP eCLIP13.46□□□□□ -0.254e-7■■□□□ 12.9
VPS52-212ENST00000445902 ASAH1Q13510 395 aa13.46□□□□□ -0.25
VPS52-212ENST00000445902 DSC3Q14574 896 aa13.46□□□□□ -0.25
VPS52-212ENST00000445902 TTLL9Q3SXZ7 439 aa13.46□□□□□ -0.25
VPS52-212ENST00000445902 SLC35F1Q5T1Q4 408 aa13.46□□□□□ -0.25
VPS52-212ENST00000445902 KRT73Q86Y46 540 aa13.46□□□□□ -0.25
VPS52-212ENST00000445902 SPATA2LQ8IUW3 424 aaPredicted RBP13.46□□□□□ -0.25
VPS52-212ENST00000445902 SLC34A3Q8N130 599 aa13.46□□□□□ -0.25
VPS52-212ENST00000445902 C1orf74Q96LT6 269 aa13.46□□□□□ -0.25
VPS52-212ENST00000445902 CD244Q9BZW8 370 aa13.46□□□□□ -0.25
VPS52-212ENST00000445902 PRM3Q9NNZ6 103 aa13.46□□□□□ -0.25
VPS52-212ENST00000445902 TLR6Q9Y2C9 796 aa13.46□□□□□ -0.25
VPS52-212ENST00000445902 E9PQ18 207 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms