RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 F9P00740 461 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 CTPS1P17812 591 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 C4BPBP20851 252 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 GALNSP34059 522 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 SCN1BQ07699 218 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 EXOSC2Q13868 293 aaKnown RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 SNTB1Q13884 538 aaKnown RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 IRF4Q15306 451 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 ATP6AP1Q15904 470 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 CYBRD1Q53TN4 286 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 MLIPQ5VWP3 458 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 TMEM198Q66K66 360 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 REP15Q6BDI9 236 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 PAPD4Q6PIY7 484 aaKnown RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 PDZD4Q76G19 769 aaPredicted RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 NIM1KQ8IY84 436 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 SLC22A15Q8IZD6 547 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 ZNF619Q8N2I2 560 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 PGBD3Q8N328 593 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 ZNF511Q8NB15 262 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 STYXQ8WUJ0 223 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 SNX33Q8WV41 574 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 REPS1Q96D71 796 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 SORCS2Q96PQ0 1159 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 OR2A14Q96R47 310 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 CRB3Q9BUF7 120 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 CPEB1Q9BZB8 566 aaKnown RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 DHX35Q9H5Z1 703 aaKnown RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 KRT84Q9NSB2 600 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 FAM49BQ9NUQ9 324 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 NSMCE4AQ9NXX6 385 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 CACNA2D2Q9NY47 1150 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 MPP6Q9NZW5 540 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 MED11Q9P086 117 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 RNF181Q9P0P0 153 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 XPR1Q9UBH6 696 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 IGKV6D-21A0A0A0MT36 114 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 KCNU1A8MYU2 1149 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 SDHDO14521 159 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 WBP4O75554 376 aaKnown RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 GRAP2O75791 330 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 ITGAMP11215 1152 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 ETV6P41212 452 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 NR0B1P51843 470 aaKnown RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 GP2P55259 537 aaKnown RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 NCS1P62166 190 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 HTRA4P83105 476 aaPredicted RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 ZNF177Q13360 481 aaPredicted RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 DHCR24Q15392 516 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 ARHGAP17Q68EM7 881 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 GK5Q6ZS86 529 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 REC114Q7Z4M0 266 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 SPRED1Q7Z699 444 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 SYVN1Q86TM6 617 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 TMEM135Q86UB9 458 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 PSTKQ8IV42 348 aaKnown RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 C7orf61Q8IZ16 206 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 CENPLQ8N0S6 344 aaPredicted RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 FCRL3Q96P31 734 aaPredicted RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 KCTD15Q96SI1 283 aaPredicted RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 C2orf88Q9BSF0 95 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 PCDHAC1Q9H158 963 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 TASP1Q9H6P5 420 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 DDX31Q9H8H2 851 aaKnown RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 NRBP2Q9NSY0 501 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 USE1Q9NZ43 259 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 TSPAN16Q9UKR8 245 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 SLC22A14Q9Y267 594 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 POLR3HQ9Y535 204 aaPredicted RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 USP3Q9Y6I4 520 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 RNF215Q9Y6U7 377 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 DOCK1Q14185 1865 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 METTL21EPA6NDL7 271 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 ZNF879B4DU55 563 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 ARVCFO00192 962 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 MMP20O60882 483 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 APOC3P02656 99 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 PFKLP17858 780 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 ATP5A1P25705 553 aaKnown RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 PSMB4P28070 264 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 ELK4P28324 431 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 SOX4Q06945 474 aaPredicted RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 RPA4Q13156 261 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 FGFBP1Q14512 234 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 TBCELQ5QJ74 424 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 MANEAQ5SRI9 462 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 ANKRD54Q6NXT1 300 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 C8orf82Q6P1X6 216 aaPredicted RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 PGAP1Q75T13 922 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 RAB44Q7Z6P3 723 aaPredicted RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 NLRP8Q86W28 1048 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 DHFR2Q86XF0 187 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 RDH10Q8IZV5 341 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 C1orf127Q8N9H9 656 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 WDR36Q8NI36 951 aaKnown RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 CENPIQ92674 756 aaPredicted RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 SLC45A3Q96JT2 553 aa7.1□□□□□ -1.27
GARNL3-205ENST00000435213 TRNT1Q96Q11 434 aaKnown RBP7.1□□□□□ -1.27
GARNL3-205ENST00000435213 GPR22Q99680 433 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms