RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 CCDC51Q96ER9 411 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 PANX3Q96QZ0 392 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 BTBD10Q9BSF8 475 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 ZNF577Q9BSK1 485 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 LMF2Q9BU23 707 aaKnown RBP5.2□□□□□ -1.58
LINC00348-201ENST00000428761 ZSCAN5AQ9BUG6 496 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 CARD9Q9H257 536 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 FOXP1Q9H334 677 aaPredicted RBP5.2□□□□□ -1.58
LINC00348-201ENST00000428761 CATSPERBQ9H7T0 1116 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 RMND5AQ9H871 391 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 LRRC40Q9H9A6 602 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 CDH20Q9HBT6 801 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 PALMDQ9NP74 551 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 KLHL1Q9NR64 748 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 HOMER3Q9NSC5 361 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 NPAP1Q9NZP6 1156 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 SUN2Q9UH99 717 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 MTUS1Q9ULD2 1270 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 ITM2BQ9Y287 266 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 LOXL2Q9Y4K0 774 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 SPACA6W5XKT8 324 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 NRAPQ86VF7 1730 aa5.2□□□□□ -1.58
LINC00348-201ENST00000428761 TRIM49BA6NDI0 452 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 DUXAA6NLW8 204 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 CTAGE5O15320 804 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 ERLIN1O75477 346 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 ZNF821O75541 412 aaPredicted RBP5.19□□□□□ -1.58
LINC00348-201ENST00000428761 GLCEO94923 617 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 ACSL3O95573 720 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 LBPP18428 481 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 GALP22466 123 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 TAGLN2P37802 199 aaKnown RBP5.19□□□□□ -1.58
LINC00348-201ENST00000428761 ARHGAP25P42331 645 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 ETV1P50549 477 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 SRP54P61011 504 aaKnown RBP5.19□□□□□ -1.58
LINC00348-201ENST00000428761 GALK2Q01415 458 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 SPIBQ01892 262 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 KCTD21Q4G0X4 260 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 MTX3Q5HYI7 312 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 GRTP1Q5TC63 336 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 ARHGAP17Q68EM7 881 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 TMPRSS11FQ6ZWK6 438 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 C1QL2Q7Z5L3 287 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 NRARPQ7Z6K4 114 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 YTHDF3Q7Z739 585 aaKnown RBP5.19□□□□□ -1.58
LINC00348-201ENST00000428761 ADAMTSL2Q86TH1 951 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 GPR180Q86V85 440 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 L3MBTL4Q8NA19 623 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 DRAXINQ8NBI3 349 aaPredicted RBP5.19□□□□□ -1.58
LINC00348-201ENST00000428761 ZNF778Q96MU6 729 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 ZNF582Q96NG8 517 aaPredicted RBP5.19□□□□□ -1.58
LINC00348-201ENST00000428761 EDEM2Q9BV94 578 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 SLC29A3Q9BZD2 475 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 DDX47Q9H0S4 455 aaKnown RBP5.19□□□□□ -1.58
LINC00348-201ENST00000428761 RPF1Q9H9Y2 349 aaKnown RBP5.19□□□□□ -1.58
LINC00348-201ENST00000428761 FANCEQ9HB96 536 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 PCDH9Q9HC56 1237 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 DNAJC4Q9NNZ3 241 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 TCF7L2Q9NQB0 619 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 TCP11L1Q9NUJ3 509 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 OSER1Q9NX31 292 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 DNPEPQ9ULA0 475 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 CCDC144AA2RUR9 1427 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 SSH2Q76I76 1423 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 UBE4BO95155 1302 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 WDR19Q8NEZ3 1342 aa5.19□□□□□ -1.58
LINC00348-201ENST00000428761 HEG1Q9ULI3 1381 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 CENPFP49454 3210 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 IGHV4-28A0A0C4DH34 117 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 ZSCAN5BA6NJL1 495 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 E5RJQ4 531 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 TLR4O00206 839 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 PPIP5K2O43314 1243 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 LUC7L3O95232 432 aaKnown RBP5.18□□□□□ -1.58
LINC00348-201ENST00000428761 CXCL14O95715 111 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 PLGP00747 810 aaPredicted RBP5.18□□□□□ -1.58
LINC00348-201ENST00000428761 RHOXF2BP0C7M4 288 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 EPCAMP16422 314 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 PTPN4P29074 926 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 STIP1P31948 543 aaKnown RBP5.18□□□□□ -1.58
LINC00348-201ENST00000428761 HSD17B3P37058 310 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 RPL3P39023 403 aaKnown RBP5.18□□□□□ -1.58
LINC00348-201ENST00000428761 CLCNKAP51800 687 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 MAPK12P53778 367 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 VCPP55072 806 aaKnown RBP5.18□□□□□ -1.58
LINC00348-201ENST00000428761 CD81P60033 236 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 TRAF1Q13077 416 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 SPP2Q13103 211 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 PDZK1IP1Q13113 114 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 CUL3Q13618 768 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 TSTA3Q13630 321 aaPredicted RBP5.18□□□□□ -1.58
LINC00348-201ENST00000428761 ZMYND11Q15326 602 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 TCTE1Q5JU00 501 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.18□□□□□ -1.58
LINC00348-201ENST00000428761 ZNF626Q68DY1 528 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 PODNL1Q6PEZ8 512 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 PIGWQ7Z7B1 504 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 PHLDB2Q86SQ0 1253 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 TMPRSS11BQ86T26 416 aa5.18□□□□□ -1.58
LINC00348-201ENST00000428761 SPATA2LQ8IUW3 424 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms