RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 DSG2Q14126 1118 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 PTGR1Q14914 329 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 LRRC37A5PQ49AS3 106 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 SAMD12Q8N8I0 201 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 ADAP2Q9NPF8 381 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 WRAP73Q9P2S5 460 aaPredicted RBP12□□□□□ -0.49
CLCN4-203ENST00000421085 DUXAA6NLW8 204 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 EEF1E1O43324 174 aaKnown RBP12□□□□□ -0.49
CLCN4-203ENST00000421085 DFNA5O60443 496 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 DNAJB5O75953 348 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 APOC3P02656 99 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 GDF5P43026 501 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 EMX2Q04743 252 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 NFE2L1Q14494 772 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 RFTN1Q14699 578 aaPredicted RBP12□□□□□ -0.49
CLCN4-203ENST00000421085 MOB2Q70IA6 237 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 JAGN1Q8N5M9 183 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 UPF1Q92900 1129 aaKnown RBP eCLIP12□□□□□ -0.49
CLCN4-203ENST00000421085 OXCT2Q9BYC2 517 aaPredicted RBP12□□□□□ -0.49
CLCN4-203ENST00000421085 OR51I1Q9H343 314 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 HMX1Q9NP08 348 aaPredicted RBP12□□□□□ -0.49
CLCN4-203ENST00000421085 SH2B3Q9UQQ2 575 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 LRRC70Q7Z2Q7 622 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 NUP54Q7Z3B4 507 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 GPR135Q8IZ08 494 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 ZNF101Q8IZC7 436 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 RASGEF1AQ8N9B8 481 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 LCN9Q8WX39 176 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 NTAN1Q96AB6 310 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 SCRN2Q96FV2 425 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 GSKIPQ9P0R6 139 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 PGDP52209 483 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 SLC13A2Q13183 592 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 MINDY4Q4G0A6 757 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 SCAMP5Q8TAC9 235 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 CASTOR1Q8WTX7 329 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 FUNDC2Q9BWH2 189 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 BTBD1Q9H0C5 482 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 PIGVQ9NUD9 493 aa12□□□□□ -0.49
CLCN4-203ENST00000421085 RCBTB2O95199 551 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 DNASE1P24855 282 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 OR1E2P47887 323 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 SLC45A3Q96JT2 553 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 PPIL3Q9H2H8 161 aaKnown RBP11.99□□□□□ -0.49
CLCN4-203ENST00000421085 EXOSC1Q9Y3B2 195 aaKnown RBP11.99□□□□□ -0.49
CLCN4-203ENST00000421085 SPATA31D1Q6ZQQ2 1576 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 PTPRJQ12913 1337 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 OAZ2O95190 189 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 PRKCGP05129 697 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 DNAJB13P59910 316 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 CHAF1BQ13112 559 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 ODF4Q2M2E3 257 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 GPC2Q8N158 579 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 DIP2CQ9Y2E4 1556 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 CARNS1A5YM72 827 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 HLCSP50747 726 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 CREB5Q02930 508 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 MAD2L1BPQ15013 274 aaPredicted RBP11.99□□□□□ -0.49
CLCN4-203ENST00000421085 PSRC1Q6PGN9 363 aaPredicted RBP11.99□□□□□ -0.49
CLCN4-203ENST00000421085 NUDT13Q86X67 352 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 SAMD14Q8IZD0 417 aaPredicted RBP11.99□□□□□ -0.49
CLCN4-203ENST00000421085 TMEM199Q8N511 208 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 DTX3Q8N9I9 347 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 TXNDC5Q8NBS9 432 aaKnown RBP11.99□□□□□ -0.49
CLCN4-203ENST00000421085 SHKBP1Q8TBC3 707 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 FCAMRQ8WWV6 532 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 JPH3Q8WXH2 748 aaPredicted RBP11.99□□□□□ -0.49
CLCN4-203ENST00000421085 SIGLEC10Q96LC7 697 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 NTPCRQ9BSD7 190 aaKnown RBP11.99□□□□□ -0.49
CLCN4-203ENST00000421085 SLC29A3Q9BZD2 475 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 RNF11Q9Y3C5 154 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 CYB5AP00167 134 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 PRNPP04156 253 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 GRIA2P42262 883 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 PMS2P3Q13401 168 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 CLCA4Q14CN2 919 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 SLC25A36Q96CQ1 311 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 DERL2Q9GZP9 239 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 MRPS30Q9NP92 439 aaKnown RBP11.99□□□□□ -0.49
CLCN4-203ENST00000421085 ABCB8Q9NUT2 735 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 ABCD2Q9UBJ2 740 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 CACNG4Q9UBN1 327 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 PCDHB3Q9Y5E6 796 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 ARPC4-TTLL3A0A0A6YYG9 625 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 ARL5CA6NH57 179 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 SCAMP1O15126 338 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 TREHO43280 583 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 KIAA0513O60268 411 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 MT-ND2P03891 347 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 DIO3P55073 304 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 MLLT10P55197 1068 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 CYP27C1Q4G0S4 372 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 PRR11Q96HE9 360 aaPredicted RBP11.99□□□□□ -0.49
CLCN4-203ENST00000421085 CENPMQ9NSP4 180 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 SMOXQ9NWM0 555 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 CDC14AQ9UNH5 594 aa11.99□□□□□ -0.49
CLCN4-203ENST00000421085 ZNF705EA8MWA4 302 aaPredicted RBP11.98□□□□□ -0.49
CLCN4-203ENST00000421085 ZNF670-ZNF695F2Z2N8 137 aa11.98□□□□□ -0.49
CLCN4-203ENST00000421085 HPRP00739 348 aa11.98□□□□□ -0.49
CLCN4-203ENST00000421085 SNRPD2P62316 118 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms