RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 VAPAQ9P0L0 249 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 PCOLCE2Q9UKZ9 415 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 CYP8B1Q9UNU6 501 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 DMTF1Q9Y222 760 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 PCDHGA2Q9Y5H1 932 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 COLEC10Q9Y6Z7 277 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 PCM1Q15154 2024 aa13.53□□□□□ -0.24
LIMS2-206ENST00000409754 DNAH14Q0VDD8 3507 aa13.52□□□□□ -0.24
LIMS2-206ENST00000409754 TRBV5-3A0A0A0MS03 114 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 DFNA5O60443 496 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 LRATO95237 230 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 ANXA4P09525 319 aaPredicted RBP13.52□□□□□ -0.25
LIMS2-206ENST00000409754 ATP6V1B2P21281 511 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 PTX3P26022 381 aaPredicted RBP13.52□□□□□ -0.25
LIMS2-206ENST00000409754 NDUFS1P28331 727 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 NUDT1P36639 197 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 KIR3DL1P43629 444 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 RABIFP47224 123 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 SRP54P61011 504 aaKnown RBP13.52□□□□□ -0.25
LIMS2-206ENST00000409754 UGT8Q16880 541 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 PGS1Q32NB8 556 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 RUNDC3AQ59EK9 446 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 ICE2Q659A1 982 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 CYP2R1Q6VVX0 501 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 Q6ZSR6 202 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 VN1R5Q7Z5H4 357 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 ABI3BPQ7Z7G0 1075 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 METTL4Q8N3J2 472 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 ZNF740Q8NDX6 193 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 OR8J2Q8NGG1 315 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 OR52E1Q8NGJ3 308 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 GAB3Q8WWW8 586 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 TSACCQ96A04 125 aaPredicted RBP13.52□□□□□ -0.25
LIMS2-206ENST00000409754 PAIP1Q9H074 479 aaKnown RBP13.52□□□□□ -0.25
LIMS2-206ENST00000409754 SERHLQ9NQF3 203 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 CUEDC1Q9NWM3 386 aaPredicted RBP13.52□□□□□ -0.25
LIMS2-206ENST00000409754 TRNAU1APQ9NX07 287 aaKnown RBP13.52□□□□□ -0.25
LIMS2-206ENST00000409754 WSB2Q9NYS7 404 aaPredicted RBP13.52□□□□□ -0.25
LIMS2-206ENST00000409754 SCHIP1Q9P0W5 487 aaPredicted RBP13.52□□□□□ -0.25
LIMS2-206ENST00000409754 TBC1D29Q9UFV1 150 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 PCDHB11Q9Y5F2 797 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 SNX13Q9Y5W8 968 aa13.52□□□□□ -0.25
LIMS2-206ENST00000409754 SCAMP1O15126 338 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 ARPC2O15144 300 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 AKAP10O43572 662 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 PCDH7O60245 1069 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 SH3BGRLO75368 114 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 TGFB1P01137 390 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 COX7A2P14406 83 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 PSMB5P28074 263 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 CD6P30203 668 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 SLC7A1P30825 629 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 GRIA3P42263 894 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 MTPNP58546 118 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 PLIN5Q00G26 463 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 PRDX1Q06830 199 aaKnown RBP13.51□□□□□ -0.25
LIMS2-206ENST00000409754 SELPLGQ14242 412 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 RBBP5Q15291 538 aaKnown RBP13.51□□□□□ -0.25
LIMS2-206ENST00000409754 TAF11Q15544 211 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 ALG11Q2TAA5 492 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 AASDHQ4L235 1098 aaPredicted RBP13.51□□□□□ -0.25
LIMS2-206ENST00000409754 SWT1Q5T5J6 900 aaKnown RBP13.51□□□□□ -0.25
LIMS2-206ENST00000409754 ARMCX6Q7L4S7 300 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 COMMD6Q7Z4G1 85 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 CAMKMTQ7Z624 323 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 MSRB3Q8IXL7 192 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 GPR156Q8NFN8 814 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 GFM2Q969S9 779 aaKnown RBP13.51□□□□□ -0.25
LIMS2-206ENST00000409754 OR51B5Q9H339 312 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 XKR8Q9H6D3 395 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 FAM120CQ9NX05 1096 aaKnown RBP13.51□□□□□ -0.25
LIMS2-206ENST00000409754 SLC25A37Q9NYZ2 338 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.51□□□□□ -0.25
LIMS2-206ENST00000409754 EGFL7Q9UHF1 273 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 ICKQ9UPZ9 632 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 AP4S1Q9Y587 144 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 PCDHB3Q9Y5E6 796 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 DGKBQ9Y6T7 804 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 CFAP54Q96N23 3096 aa13.51□□□□□ -0.25
LIMS2-206ENST00000409754 SCAMP2O15127 329 aaKnown RBP13.5□□□□□ -0.25
LIMS2-206ENST00000409754 ZNF217O75362 1048 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 SEMA3DO95025 777 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 RASGRP1O95267 797 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 ACADSP16219 412 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 HOXB9P17482 250 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-206ENST00000409754 AK4P27144 223 aaPredicted RBP13.5□□□□□ -0.25
LIMS2-206ENST00000409754 HPCAL1P37235 193 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 NBL1P41271 181 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 TRPC1P48995 793 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 ABATP80404 500 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 NHLH1Q02575 133 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 CYP4F3Q08477 520 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 ZNF763Q0D2J5 394 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 SF1Q15637 639 aaKnown RBP13.5□□□□□ -0.25
LIMS2-206ENST00000409754 TRIP10Q15642 601 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 OR4F3Q6IEY1 312 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 RD3Q7Z3Z2 195 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 IFNEQ86WN2 208 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 PROSER1Q86XN7 944 aa13.5□□□□□ -0.25
LIMS2-206ENST00000409754 TMEM132CQ8N3T6 1108 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms