RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 CLDN4O14493 209 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 TTI1O43156 1089 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 NDUFS4O43181 175 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 OR1F1O43749 312 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 SEC31AO94979 1220 aaKnown RBP12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 AHSGP02765 367 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 ALOX12P18054 663 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 ELK3P41970 407 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 TNFSF10P50591 281 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 CSNK1G2P78368 415 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 POU4F1Q01851 419 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 SRSF11Q05519 484 aaKnown RBP12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 ZNF33BQ06732 778 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 NSDHLQ15738 373 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 EIF2S3LQ2VIR3 472 aaKnown RBP12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 BTBD16Q32M84 506 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 PAGE2BQ5JRK9 111 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 TEDDM1Q5T9Z0 273 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 CUZD1Q86UP6 607 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 LRRC56Q8IYG6 542 aaPredicted RBP12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 AMER3Q8N944 861 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 SRFBP1Q8NEF9 429 aaKnown RBP12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 OR56A3Q8NH54 315 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 GRHL3Q8TE85 626 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 PYROXD1Q8WU10 500 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 UBE2E3Q969T4 207 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 TBC1D20Q96BZ9 403 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 CYTH2Q99418 400 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 NDNQ99608 321 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 UTP23Q9BRU9 249 aaKnown RBP12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 TRIM56Q9BRZ2 755 aaKnown RBP12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 PRM3Q9NNZ6 103 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 TRMT1Q9NXH9 659 aaKnown RBP12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 STMN3Q9NZ72 180 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 GPRC5BQ9NZH0 403 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 CHMP2BQ9UQN3 213 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 UTP11Q9Y3A2 253 aaKnown RBP12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 SPACA6W5XKT8 324 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 NUP210LQ5VU65 1888 aa12.17□□□□□ -0.46
SNORD88B-201ENST00000408454 TENM4Q6N022 2769 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 FCHO1O14526 889 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 PRAMEF2O60811 474 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 CTSBP07858 339 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 CDH1P12830 882 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 RNH1P13489 461 aaKnown RBP12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 ZNF37AP17032 561 aaPredicted RBP12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 SERPINB1P30740 379 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 SOX11P35716 441 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 UQCRFS1P47985 274 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 ATP6V0D1P61421 351 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 EEF1A2Q05639 463 aaKnown RBP12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 PDIA2Q13087 525 aaKnown RBP12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 LAPTM5Q13571 262 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 HIST2H2ACQ16777 129 aaPredicted RBP12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 STEAP4Q687X5 459 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 HIST2H2AA3Q6FI13 130 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 HIBCHQ6NVY1 386 aaPredicted RBP12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 ZC3H7AQ8IWR0 971 aaKnown RBP12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 KLHL7Q8IXQ5 586 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 PLPP5Q8NEB5 264 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 OR9A4Q8NGU2 314 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 BRIX1Q8TDN6 353 aaKnown RBP12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 TMEM125Q96AQ2 219 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 TM4SF19Q96DZ7 209 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 KRT12Q99456 494 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 CENPKQ9BS16 269 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 TSPYL1Q9H0U9 437 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 ATG10Q9H0Y0 220 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 RHOJQ9H4E5 214 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 KCNK13Q9HB14 408 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 GPAMQ9HCL2 828 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 GALPQ9UBC7 116 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 CTNNAL1Q9UBT7 734 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 MED16Q9Y2X0 877 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 TEX264Q9Y6I9 313 aa12.16□□□□□ -0.46
SNORD88B-201ENST00000408454 FAM95CA0A1B0GW59 222 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 FOXS1O43638 330 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 DYRK3O43781 588 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 JRKO75564 520 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 KLHL18O94889 574 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 SERPIND1P05546 499 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 FHP07954 510 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 NPPBP16860 134 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 ITGA8P53708 1063 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 MRPL49Q13405 166 aaKnown RBP12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 NAB1Q13506 487 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 ABRAXAS2Q15018 415 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 TERF2Q15554 542 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 KRTCAP3Q53RY4 240 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 TMEM207Q6UWW9 146 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 RPTNQ6XPR3 784 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 CYS1Q717R9 158 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 OR4K1Q8NGD4 311 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 NT5CQ8TCD5 201 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 NR4A3Q92570 626 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 C8orf44Q96CB5 159 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 CAPZA3Q96KX2 299 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 SLC30A3Q99726 388 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 CPNE1Q99829 537 aa12.15□□□□□ -0.46
SNORD88B-201ENST00000408454 CCDC77Q9BR77 488 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms