RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 NXPE2Q96DL1 559 aa13.34□□□□□ -0.27
RUNX3-203ENST00000399916 TCF25Q9BQ70 676 aa13.34□□□□□ -0.27
RUNX3-203ENST00000399916 DPEP3Q9H4B8 488 aa13.34□□□□□ -0.27
RUNX3-203ENST00000399916 POT1Q9NUX5 634 aa13.34□□□□□ -0.27
RUNX3-203ENST00000399916 OR6C2Q9NZP2 312 aa13.34□□□□□ -0.27
RUNX3-203ENST00000399916 ADAMTSL1Q8N6G6 1762 aa13.34□□□□□ -0.27
RUNX3-203ENST00000399916 CCNB2O95067 398 aa13.33□□□□□ -0.27
RUNX3-203ENST00000399916 RETP07949 1114 aa13.33□□□□□ -0.27
RUNX3-203ENST00000399916 HIST1H2AGP0C0S8 130 aaPredicted RBP13.33□□□□□ -0.27
RUNX3-203ENST00000399916 TGFB3P10600 412 aa13.33□□□□□ -0.27
RUNX3-203ENST00000399916 ZNF35P13682 527 aa13.33□□□□□ -0.27
RUNX3-203ENST00000399916 HIST1H2ADP20671 130 aa13.33□□□□□ -0.27
RUNX3-203ENST00000399916 DNAJA1P31689 397 aaKnown RBP13.33□□□□□ -0.27
RUNX3-203ENST00000399916 MC2RQ01718 297 aa13.33□□□□□ -0.27
RUNX3-203ENST00000399916 FBXO16Q8IX29 292 aaPredicted RBP13.33□□□□□ -0.27
RUNX3-203ENST00000399916 NLGN4XQ8N0W4 816 aa13.33□□□□□ -0.27
RUNX3-203ENST00000399916 MINDY1Q8N5J2 469 aa13.33□□□□□ -0.27
RUNX3-203ENST00000399916 SLC9A6Q92581 669 aa13.33□□□□□ -0.27
RUNX3-203ENST00000399916 AP2M1Q96CW1 435 aa13.33□□□□□ -0.27
RUNX3-203ENST00000399916 HIST1H2AHQ96KK5 128 aa13.33□□□□□ -0.27
RUNX3-203ENST00000399916 HIST1H2AJQ99878 128 aa13.33□□□□□ -0.27
RUNX3-203ENST00000399916 H2AFJQ9BTM1 129 aa13.33□□□□□ -0.27
RUNX3-203ENST00000399916 ACTR6Q9GZN1 396 aa13.33□□□□□ -0.27
RUNX3-203ENST00000399916 SYNDIG1Q9H7V2 258 aa13.33□□□□□ -0.27
RUNX3-203ENST00000399916 DHRS7Q9Y394 339 aa13.33□□□□□ -0.27
RUNX3-203ENST00000399916 SNX10Q9Y5X0 201 aa13.33□□□□□ -0.27
RUNX3-203ENST00000399916 CBX4O00257 560 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 KPNA3O00505 521 aaPredicted RBP13.33□□□□□ -0.28
RUNX3-203ENST00000399916 PCDHGA12O60330 932 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 EGFRP00533 1210 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 MAP2K6P52564 334 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 RAB5BP61020 215 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 CRYZQ08257 329 aaKnown RBP13.33□□□□□ -0.28
RUNX3-203ENST00000399916 IRF5Q13568 498 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 NTRK2Q16620 822 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 METTL3Q86U44 580 aaKnown RBP13.33□□□□□ -0.28
RUNX3-203ENST00000399916 C12orf45Q8N5I9 185 aaPredicted RBP13.33□□□□□ -0.28
RUNX3-203ENST00000399916 OR10G2Q8NGC3 310 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 OR6M1Q8NGM8 313 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 RSPH9Q9H1X1 276 aaPredicted RBP13.33□□□□□ -0.28
RUNX3-203ENST00000399916 GTF2A1LQ9UNN4 478 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 LTBP3Q9NS15 1303 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 COL5A3P25940 1745 aaPredicted RBP13.33□□□□□ -0.28
RUNX3-203ENST00000399916 SYN1P17600 705 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 PFKLP17858 780 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 LHCGRP22888 699 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 STAT5AP42229 794 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 PTGR1Q14914 329 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 ARHGAP15Q53QZ3 475 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 CDC73Q6P1J9 531 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 METTL7BQ6UX53 244 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 TTLQ8NG68 377 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 GAS2L1Q99501 681 aaPredicted RBP13.33□□□□□ -0.28
RUNX3-203ENST00000399916 GAL3ST1Q99999 423 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 DUSP16Q9BY84 665 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 SMOC2Q9H3U7 446 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 C14orf105Q9NVL8 296 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 C1orf109Q9NX04 203 aa13.33□□□□□ -0.28
RUNX3-203ENST00000399916 SLC28A1O00337 649 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 RP2O75695 350 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 ARIH2O95376 493 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 AKR1C2P52895 323 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 AKR1C1Q04828 323 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 PRKCDQ05655 676 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 NPRL3Q12980 569 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 TARDBPQ13148 414 aaKnown RBP eCLIP13.32□□□□□ -0.28
RUNX3-203ENST00000399916 SYTL3Q4VX76 610 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 SPANXN4Q5MJ08 99 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 SFRP4Q6FHJ7 346 aaPredicted RBP13.32□□□□□ -0.28
RUNX3-203ENST00000399916 USP50Q70EL3 339 aaPredicted RBP13.32□□□□□ -0.28
RUNX3-203ENST00000399916 SPRED1Q7Z699 444 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 VTCN1Q7Z7D3 282 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 ZNF433Q8N7K0 673 aaPredicted RBP13.32□□□□□ -0.28
RUNX3-203ENST00000399916 HASPINQ8TF76 798 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 CDCA5Q96FF9 252 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 ST6GAL2Q96JF0 529 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 NIFKQ9BYG3 293 aaKnown RBP13.32□□□□□ -0.28
RUNX3-203ENST00000399916 NXF3Q9H4D5 531 aaKnown RBP13.32□□□□□ -0.28
RUNX3-203ENST00000399916 ZNF214Q9UL59 606 aaPredicted RBP13.32□□□□□ -0.28
RUNX3-203ENST00000399916 CITO14578 2027 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 TEX13CA0A0J9YWL9 993 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 FAM234BA2RU67 622 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 LEUTXA8MZ59 168 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 ITGBL1O95965 494 aaPredicted RBP13.32□□□□□ -0.28
RUNX3-203ENST00000399916 S100A2P29034 98 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 OR1E2P47887 323 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 RGS4P49798 205 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 GRIK2Q13002 908 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 XAF1Q6GPH4 301 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 THAP6Q8TBB0 222 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 APOLD1Q96LR9 279 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 GPR22Q99680 433 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 C1QTNF7Q9BXJ2 289 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 RHCGQ9UBD6 479 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 DNAJC15Q9Y5T4 150 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 INHBBP09529 407 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 JUNBP17275 347 aaPredicted RBP13.32□□□□□ -0.28
RUNX3-203ENST00000399916 PSMA6P60900 246 aaKnown RBP13.32□□□□□ -0.28
RUNX3-203ENST00000399916 SLC10A7Q0GE19 358 aa13.32□□□□□ -0.28
RUNX3-203ENST00000399916 SLC10A6Q3KNW5 377 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms