RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 JUNP05412 331 aaKnown RBP12.71□□□□□ -0.37
SEC13-209ENST00000397117 EPHA3P29320 983 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 HNF4AP41235 474 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 HNRNPH2P55795 449 aaKnown RBP12.71□□□□□ -0.37
SEC13-209ENST00000397117 PCDH1Q08174 1060 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 IFT88Q13099 833 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 DOC2AQ14183 400 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 TBCCQ15814 346 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 HIST2H2ACQ16777 129 aaPredicted RBP12.71□□□□□ -0.37
SEC13-209ENST00000397117 PAGE2BQ5JRK9 111 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 ATG9BQ674R7 924 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 HIST2H2AA3Q6FI13 130 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 NXPE4Q6UWF7 544 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 C6orf89Q6UWU4 347 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 SLCO4C1Q6ZQN7 724 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 SFTPA2Q8IWL1 248 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 SLC22A18Q96BI1 424 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 PTCD3Q96EY7 689 aaKnown RBP12.71□□□□□ -0.37
SEC13-209ENST00000397117 EHD1Q9H4M9 534 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 WDR55Q9H6Y2 383 aaPredicted RBP12.71□□□□□ -0.37
SEC13-209ENST00000397117 TCF7L2Q9NQB0 619 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 BTRCQ9Y297 605 aa12.71□□□□□ -0.37
SEC13-209ENST00000397117 A0A1W2PPV9 198 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 ISM1B1AKI9 464 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 MANBAO00462 879 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 VPS4BO75351 444 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 CCNDBP1O95273 360 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 RPLP0P05388 317 aaKnown RBP12.7□□□□□ -0.38
SEC13-209ENST00000397117 CHRM5P08912 532 aaPredicted RBP12.7□□□□□ -0.38
SEC13-209ENST00000397117 LINC00032P0C843 101 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 C1GALT1C1LP0DN25 315 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 LIPCP11150 499 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 CDH1P12830 882 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 CASP2P42575 452 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 MAZP56270 477 aaKnown RBP12.7□□□□□ -0.38
SEC13-209ENST00000397117 ZFP36L1Q07352 338 aaKnown RBP12.7□□□□□ -0.38
SEC13-209ENST00000397117 LAPTM5Q13571 262 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 SF1Q15637 639 aaKnown RBP12.7□□□□□ -0.38
SEC13-209ENST00000397117 ZRSR2Q15696 482 aaKnown RBP12.7□□□□□ -0.38
SEC13-209ENST00000397117 SGO1Q5FBB7 561 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 TCHHL1Q5QJ38 904 aaPredicted RBP12.7□□□□□ -0.38
SEC13-209ENST00000397117 ICE2Q659A1 982 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 GRHL2Q6ISB3 625 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 OGFOD3Q6PK18 319 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 TMEM26Q6ZUK4 368 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 STON2Q8WXE9 905 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 REPS1Q96D71 796 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 TMEM74Q96NL1 305 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 LRRC37BQ96QE4 947 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 EFCAB11Q9BUY7 163 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 LRRN3Q9H3W5 708 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 RIC8BQ9NVN3 520 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 TRIM33Q9UPN9 1127 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 PIPSLA2A3N6 862 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 OR6C74A6NCV1 312 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 SDHDO14521 159 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 CCDC22O60826 627 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 VARSP26640 1264 aaKnown RBP12.7□□□□□ -0.38
SEC13-209ENST00000397117 PSMB5P28074 263 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 FASLGP48023 281 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 CCR8P51685 355 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 ABATP80404 500 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 PRDX1Q06830 199 aaKnown RBP12.7□□□□□ -0.38
SEC13-209ENST00000397117 SLBPQ14493 270 aaKnown RBP eCLIP12.7□□□□□ -0.38
SEC13-209ENST00000397117 KIR2DS3Q14952 304 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 C14orf28Q4W4Y0 310 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 COLEC12Q5KU26 742 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 CATSPEREQ5SY80 951 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 FAM219BQ5XKK7 198 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 FRG2Q64ET8 278 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 SCIMPQ6UWF3 145 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 MTDHQ86UE4 582 aaKnown RBP12.7□□□□□ -0.38
SEC13-209ENST00000397117 GPR156Q8NFN8 814 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 OR6C4Q8NGE1 309 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 OR10G6Q8NH81 332 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 CEP70Q8NHQ1 597 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 ACTRT2Q8TDY3 377 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 UBE2E3Q969T4 207 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 WDR34Q96EX3 536 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 FRG2BQ96QU4 278 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 OR52B2Q96RD2 323 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 SLC38A3Q99624 504 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 CCDC28BQ9BUN5 200 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.7□□□□□ -0.38
SEC13-209ENST00000397117 TUBB1Q9H4B7 451 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 PELI2Q9HAT8 420 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 MRPS30Q9NP92 439 aaKnown RBP12.7□□□□□ -0.38
SEC13-209ENST00000397117 ZNF490Q9ULM2 529 aaPredicted RBP12.7□□□□□ -0.38
SEC13-209ENST00000397117 SH2B3Q9UQQ2 575 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 PCDHGA11Q9Y5H2 935 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 PTGDR2Q9Y5Y4 395 aa12.7□□□□□ -0.38
SEC13-209ENST00000397117 BSNQ9UPA5 3926 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 KCNE1BA0A087WTH5 132 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 ATP6AP2A0A1C7CYW4 349 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 GSAPA4D1B5 854 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 RHPN2P1A8MT19 583 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 E9PBE3 544 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 H0YIV9 168 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 BTN3A3O00478 584 aa12.69□□□□□ -0.38
SEC13-209ENST00000397117 RGS14O43566 566 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms