RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ARVCFO00192 962 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 CBX4O00257 560 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 SEC14L2O76054 403 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 RLN1P04808 185 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 LCP1P13796 627 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 DRD5P21918 477 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 XPAP23025 273 aaPredicted RBP8.17□□□□□ -1.1
NDE1-202ENST00000396355 VIPR1P32241 457 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 PREPP48147 710 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 SSTP61278 116 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 HSF5Q4G112 596 aaPredicted RBP8.17□□□□□ -1.1
NDE1-202ENST00000396355 INTS11Q5TA45 600 aaKnown RBP8.17□□□□□ -1.1
NDE1-202ENST00000396355 RETSATQ6NUM9 610 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 PAQR7Q86WK9 346 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 NT5DC4Q86YG4 428 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 COLGALT2Q8IYK4 626 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 ADGRG5Q8IZF4 528 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 Q8N402 240 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 OR52K1Q8NGK4 314 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 SLC38A4Q969I6 547 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 SPATA5L1Q9BVQ7 753 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 REEP4Q9H6H4 257 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 RC3H2Q9HBD1 1191 aaKnown RBP8.17□□□□□ -1.1
NDE1-202ENST00000396355 OLA1Q9NTK5 396 aaKnown RBP8.17□□□□□ -1.1
NDE1-202ENST00000396355 FAM86C1Q9NVL1 165 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 THUMPD1Q9NXG2 353 aaKnown RBP8.17□□□□□ -1.1
NDE1-202ENST00000396355 CNTN3Q9P232 1028 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 HCN2Q9UL51 889 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 SLC28A1O00337 649 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 NPHS1O60500 1241 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 POMCP01189 267 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 BMP2P12643 396 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 FEN1P39748 380 aaKnown RBP8.17□□□□□ -1.1
NDE1-202ENST00000396355 GZMKP49863 264 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 RORCP51449 518 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 CLCN4P51793 760 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 EPHA5P54756 1037 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 GRB7Q14451 532 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 MXD4Q14582 209 aaPredicted RBP8.17□□□□□ -1.1
NDE1-202ENST00000396355 PTPRRQ15256 657 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 TSNQ15631 228 aaKnown RBP8.17□□□□□ -1.1
NDE1-202ENST00000396355 CYBRD1Q53TN4 286 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 INO80DQ53TQ3 878 aaPredicted RBP8.17□□□□□ -1.1
NDE1-202ENST00000396355 FAM26DQ5JW98 314 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 FAM109BQ6ICB4 259 aaPredicted RBP8.17□□□□□ -1.1
NDE1-202ENST00000396355 RAB12Q6IQ22 244 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 PAPD4Q6PIY7 484 aaKnown RBP8.17□□□□□ -1.1
NDE1-202ENST00000396355 RRM2BQ7LG56 351 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 LSMEM2Q8N112 164 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 IPMKQ8NFU5 416 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 LRRC46Q96FV0 321 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 TSPAN17Q96FV3 270 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 ST6GAL2Q96JF0 529 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 MEGF10Q96KG7 1140 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 REEP1Q9H902 201 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 SCUBE2Q9NQ36 999 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 WWOXQ9NZC7 414 aa8.17□□□□□ -1.1
NDE1-202ENST00000396355 PRRC2BQ5JSZ5 2229 aaKnown RBP8.17□□□□□ -1.1
NDE1-202ENST00000396355 ZDBF2Q9HCK1 2354 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 RIF1Q5UIP0 2472 aaKnown RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 A0A087WZ62 844 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 A0A096LPI6 279 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 C2CD4BA6NLJ0 364 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 AQP12BA6NM10 295 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 CCNDBP1O95273 360 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 C21orf33P30042 268 aaPredicted RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 CDKN2CP42773 168 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 AFF1P51825 1210 aaKnown RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 CRYZQ08257 329 aaKnown RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 C19orf57Q0VDD7 668 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 RAPSNQ13702 412 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 NR6A1Q15406 480 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 ARMC6Q6NXE6 501 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 NAPRTQ6XQN6 538 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 FAM183BPQ6ZVS7 135 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 MIB1Q86YT6 1006 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 AQP12AQ8IXF9 295 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 NLGN4XQ8N0W4 816 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 CPSF7Q8N684 471 aaKnown RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 OR10A6Q8NH74 314 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 LINC00052Q96N35 136 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 NECAB3Q96P71 396 aaPredicted RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 CMSS1Q9BQ75 279 aaKnown RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 ALG9Q9H6U8 611 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 PCOLCE2Q9UKZ9 415 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 UBQLN1Q9UMX0 589 aaKnown RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 CABYRO75952 493 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 VTNP04004 478 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 CKMT1AP12532 417 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 CD79BP40259 229 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 GBX2P52951 348 aaPredicted RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 SLC16A1P53985 500 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 HNRNPA0Q13151 305 aaKnown RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 SLC10A6Q3KNW5 377 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 CELF3Q5SZQ8 465 aaKnown RBP8.16□□□□□ -1.1
NDE1-202ENST00000396355 TMEM65Q6PI78 240 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 NUDT18Q6ZVK8 323 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 KCNMB4Q86W47 210 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 PQLC3Q8N755 202 aa8.16□□□□□ -1.1
NDE1-202ENST00000396355 OR2T12Q8NG77 320 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms