RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 TMEM156Q8N614 296 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 AQP11Q8NBQ7 271 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 STON2Q8WXE9 905 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 KCNJ9Q92806 393 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 KCNC2Q96PR1 638 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 MAPKAP1Q9BPZ7 522 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 G6PC3Q9BUM1 346 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ASPNQ9BXN1 380 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 GALPQ9UBC7 116 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 LRRC37A3O60309 1634 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 PCDHGA12O60330 932 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 CREG1O75629 220 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 SOD2P04179 222 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 HRH2P25021 359 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 SLC6A9P48067 706 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 STC1P52823 247 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 RHDQ02161 417 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 TMEM115Q12893 351 aaPredicted RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 GBX1Q14549 363 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 NPTX1Q15818 432 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 FAM214AQ32MH5 1076 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 GOLGA7Q7Z5G4 137 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF101Q8IZC7 436 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 CMTM8Q8IZV2 173 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 C2CD4AQ8NCU7 369 aaPredicted RBP5.3□□□□□ -1.56
VPS13C-204ENST00000395898 THEM6Q8WUY1 208 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 SNTG1Q9NSN8 517 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 COMMD3Q9UBI1 195 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 OARD1Q9Y530 152 aa5.3□□□□□ -1.56
VPS13C-204ENST00000395898 C9JVG2 144 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 PPEF2O14830 753 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 GRID2O43424 1007 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 POP7O75817 140 aaKnown RBP5.29□□□□□ -1.56
VPS13C-204ENST00000395898 IFNA21P01568 189 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 CHRNA1P02708 482 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF8P17098 575 aaPredicted RBP5.29□□□□□ -1.56
VPS13C-204ENST00000395898 SHMT2P34897 504 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 CHAF1BQ13112 559 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 GPR17Q13304 367 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ALG1LQ6GMV1 187 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 HFE2Q6ZVN8 426 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 Q6ZVU0 165 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 NPAS3Q8IXF0 933 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 LGI4Q8N135 537 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 C1orf52Q8N6N3 182 aaKnown RBP5.29□□□□□ -1.56
VPS13C-204ENST00000395898 MAPK15Q8TD08 544 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 TMEM234Q8WY98 164 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 TUBA1CQ9BQE3 449 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 EBF4Q9BQW3 602 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 SLC7A8Q9UHI5 535 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 B4DGG1 531 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 JUNP05412 331 aaKnown RBP5.29□□□□□ -1.56
VPS13C-204ENST00000395898 GRIA1P42261 906 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 CDK6Q00534 326 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF792Q3KQV3 632 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 AMZ1Q400G9 498 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 KIAA1614Q5VZ46 1190 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 C12orf65Q9H3J6 166 aaKnown RBP5.29□□□□□ -1.56
VPS13C-204ENST00000395898 CLDND1Q9NY35 253 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 INSL5Q9Y5Q6 135 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 C5orf51A6NDU8 294 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 SIX3O95343 332 aaPredicted RBP5.29□□□□□ -1.56
VPS13C-204ENST00000395898 CFIP05156 583 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 MAGP20916 626 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 STOMP27105 288 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 GRK5P34947 590 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ATP4BP51164 291 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 PLGLB1Q02325 96 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 GXYLT1Q4G148 440 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 RUNDC3AQ59EK9 446 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF805Q5CZA5 627 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 KLK6Q92876 244 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 KLRF1Q9NZS2 232 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 TMEM59LQ9UK28 342 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 L7N2F9 121 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 TBX1O43435 398 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 EDNRAP25101 427 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF41P51814 821 aaPredicted RBP5.29□□□□□ -1.56
VPS13C-204ENST00000395898 VAMP2P63027 116 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 CA9Q16790 459 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ZBED5Q49AG3 693 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ARHGAP40Q5TG30 622 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ASB18Q6ZVZ8 466 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ZNF627Q7L945 461 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 GID4Q8IVV7 300 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 FTMTQ8N4E7 242 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 OR4K14Q8NGD5 310 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 ESAMQ96AP7 390 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 CCDC115Q96NT0 180 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 MINDY3Q9H8M7 445 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 TAC3Q9UHF0 121 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 OR5K4A6NMS3 321 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 MECP2P51608 486 aaKnown RBP5.29□□□□□ -1.56
VPS13C-204ENST00000395898 HMGCS1Q01581 520 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 CWF19L1Q69YN2 538 aaKnown RBP5.29□□□□□ -1.56
VPS13C-204ENST00000395898 OR8H3Q8N146 312 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 SLC44A3Q8N4M1 653 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 SLC25A36Q96CQ1 311 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 LRRC46Q96FV0 321 aa5.29□□□□□ -1.56
VPS13C-204ENST00000395898 MAFFQ9ULX9 164 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms