RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 ZNF780AO75290 641 aaPredicted RBP16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ZNF250P15622 560 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 PSMD8P48556 350 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 VSX2P58304 361 aaPredicted RBP16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 CHRNEQ04844 493 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 VARS2Q5ST30 1063 aaKnown RBP16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 TSPEARQ8WU66 669 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 DUS3LQ96G46 650 aaKnown RBP16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 C8orf48Q96LL4 319 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ATP13A2Q9NQ11 1180 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 VNN3Q9NY84 501 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 NUP50Q9UKX7 468 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 GDI2P50395 445 aaKnown RBP16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 NFKB2Q00653 900 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 EXOC3L2Q2M3D2 409 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 INTS6LQ5JSJ4 861 aaKnown RBP16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 VN1R5Q7Z5H4 357 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ISL2Q96A47 359 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 A0A1W2PQH9 124 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ARHGAP33O14559 1287 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ALAS2P22557 587 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 RPS19P39019 145 aaKnown RBP16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 HSF2Q03933 536 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 TARBP2Q15633 366 aaKnown RBP16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 Q6ZSR9 355 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 BCDIN3DQ7Z5W3 292 aaKnown RBP16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 LHFPL3Q86UP9 236 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ZNF548Q8NEK5 533 aaPredicted RBP16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 SMOQ99835 787 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 C17orf62Q9BQA9 187 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 TEX12Q9BXU0 123 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 TPT1P8Q9HAU6 139 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 PCTPQ9UKL6 214 aa16.45■□□□□ 0.22
TRAF3IP1-202ENST00000391993 TRIP11Q15643 1979 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 S100A9P06702 114 aaKnown RBP16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 FGF4P08620 206 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 CELP19835 753 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 DNAJB1P25685 340 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 STC1P52823 247 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 TARDBPQ13148 414 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 SLC39A12Q504Y0 691 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 XKR6Q5GH73 641 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 CPTPQ5TA50 214 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 RANBP10Q6VN20 620 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ADCK2Q7Z695 626 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 OR4K1Q8NGD4 311 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 SLC9A7Q96T83 725 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 MRIQ9BWK5 157 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 MCCC2Q9HCC0 563 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 NUDT15Q9NV35 164 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 QPCTLQ9NXS2 382 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 GJD2Q9UKL4 321 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 LCHNA4D1U4 455 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 EEF1E1O43324 174 aaKnown RBP16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 CNR2P34972 360 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 DDOSTP39656 456 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 RHOAP61586 193 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 PPIGQ13427 754 aaKnown RBP eCLIP16.44■□□□□ 0.225e-6■■■□□ 18.4
TRAF3IP1-202ENST00000391993 PTCHD3Q3KNS1 767 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 KCTD11Q693B1 232 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 MEX3DQ86XN8 651 aaKnown RBP16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 PTRH1Q86Y79 214 aaKnown RBP16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 LSMEM1Q8N8F7 131 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ZBTB44Q8NCP5 570 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 TRPM4Q8TD43 1214 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 TMEM174Q8WUU8 243 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 KLHL6Q8WZ60 621 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ST6GAL2Q96JF0 529 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 TRIM62Q9BVG3 475 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 C1QTNF6Q9BXI9 259 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 MKL2Q9ULH7 1088 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 LYRM1O43325 122 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 MAFKO60675 156 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ESR1P03372 595 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 STOMP27105 288 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 NUP62P37198 522 aaPredicted RBP16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 RFX3P48380 749 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 PIK3R6Q5UE93 754 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 KIAA1161Q6NSJ0 714 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 FAM122CQ6P4D5 195 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 SLC46A3Q7Z3Q1 461 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ENTHD1Q8IYW4 607 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 RNF175Q8N4F7 328 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 YIPF6Q96EC8 236 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 HYLS1Q96M11 299 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 QRFPRQ96P65 431 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 AP3M1Q9Y2T2 418 aa16.44■□□□□ 0.22
TRAF3IP1-202ENST00000391993 CNTNAP1P78357 1384 aa16.43■□□□□ 0.22
TRAF3IP1-202ENST00000391993 C4BPBP20851 252 aa16.43■□□□□ 0.22
TRAF3IP1-202ENST00000391993 SNTA1Q13424 505 aa16.43■□□□□ 0.22
TRAF3IP1-202ENST00000391993 PTPRRQ15256 657 aa16.43■□□□□ 0.22
TRAF3IP1-202ENST00000391993 VMACQ2NL98 169 aa16.43■□□□□ 0.22
TRAF3IP1-202ENST00000391993 OR2T35Q8NGX2 323 aa16.43■□□□□ 0.22
TRAF3IP1-202ENST00000391993 BRSK1Q8TDC3 778 aa16.43■□□□□ 0.22
TRAF3IP1-202ENST00000391993 GATAD2BQ8WXI9 593 aa16.43■□□□□ 0.22
TRAF3IP1-202ENST00000391993 CRELD1Q96HD1 420 aa16.43■□□□□ 0.22
TRAF3IP1-202ENST00000391993 PARK7Q99497 189 aaKnown RBP16.43■□□□□ 0.22
TRAF3IP1-202ENST00000391993 TM9SF2Q99805 663 aa16.43■□□□□ 0.22
TRAF3IP1-202ENST00000391993 NLNQ9BYT8 704 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms